Bradyrhizobium xenonodulans: I3J27_25630
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Entry
I3J27_25630 CDS
T09324
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
bxn
Bradyrhizobium xenonodulans
Pathway
bxn00541
Biosynthesis of various nucleotide sugars
bxn01100
Metabolic pathways
bxn01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
bxn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
I3J27_25630 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
bxn01005
]
I3J27_25630 (rfaD)
Enzymes [BR:
bxn01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
I3J27_25630 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
bxn01005
]
Core region
I3J27_25630 (rfaD)
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
KR
Motif
Other DBs
NCBI-ProteinID:
WBL76393
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Position
complement(5370736..5371716)
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AA seq
326 aa
AA seq
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MLLVTGGAGFIGSNVVAALNEAGRSDVVVCDLLGNDGKWRNLAKRQLVDIVPPVELPDWL
KGRKLDAMIHLGAISATTATDGDLVIETNFRLSMRLLDWCTTNMVPFIYASSAATYGDGE
TGFDDDGSVQALKKLRPMNLYGWSKHMFDLAVAERVARGETLPPQCVGLKFFNVFGPNEY
HKGSMMSVLARRFDDVRAGRVVQLFKSHREGIADGDQHRDFIYVDDVVRVVMWLLATPSV
SGLFNVGTGKARSFKDLMLAAYAALGTRPNIEYVDMPESIRGAYQYFTQSEVDRLHRAGY
NGGFTTLEDAVKAYVGDYLDRPDRFR
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgttgctggtgaccggcggggccggttttatcggatcgaatgtcgtcgccgcgctgaac
gaggccggccgcagcgacgtcgtggtctgcgatctgctcggcaacgacggcaaatggcgc
aacctcgccaagcggcagcttgtggatatcgtcccaccggtcgagctgcccgactggctg
aagggccgcaagctcgacgcaatgatccatctcggggccatttccgcgaccaccgcgacc
gacggcgacctcgtgatcgagaccaatttccgtctgtcgatgcgtctgctggactggtgc
accacgaatatggtgccgttcatctacgcctcgtcggcggcgacctatggcgacggcgag
acgggctttgacgacgatggttcggtgcaagcgctgaagaaactgcggccgatgaatctc
tacggctggagcaagcacatgttcgatctcgccgtcgccgagcgcgtcgcgcgaggcgag
acgctgccgccgcaatgcgtgggcctgaaattcttcaacgtgttcggccccaacgaatac
cacaagggctcgatgatgagcgtgctggcgcgccgcttcgacgatgtcagagcgggccgt
gtcgtgcagctgttcaagtcgcatcgcgaaggcatcgccgacggcgatcagcaccgcgat
ttcatctatgtcgacgatgtcgtgcgcgtcgtgatgtggttgctggcgacgccgtcggtg
tccggcctcttcaacgtcggaaccggcaaggcacgcagcttcaaggacctgatgttagcc
gcctatgcggcactcggcactaggccgaacatcgaatatgtcgacatgcccgaaagcatt
cgcggcgcctaccagtacttcacccagagcgaggtcgatcgcctccaccgcgccggctat
aacggtggcttcacgacgctcgaggacgcggtgaaagcctatgtcggggattatctcgac
cggcccgaccgcttccgctga
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