Bradyrhizobium xenonodulans: I3J27_28235
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Entry
I3J27_28235 CDS
T09324
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bxn
Bradyrhizobium xenonodulans
Pathway
bxn03420
Nucleotide excision repair
bxn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bxn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
I3J27_28235
03430 Mismatch repair
I3J27_28235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bxn03400
]
I3J27_28235
Enzymes [BR:
bxn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I3J27_28235
DNA repair and recombination proteins [BR:
bxn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
I3J27_28235
MMR (mismatch excision repair)
Other MMR factors
I3J27_28235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
AAA_11
DEAD
NeA_P2
Motif
Other DBs
NCBI-ProteinID:
WBL76883
UniProt:
A0ABY7MEQ8
LinkDB
All DBs
Position
5946910..5949489
Genome browser
AA seq
859 aa
AA seq
DB search
MIRMTEPSKITDVPDHQPAAGGIAARARASVGPKYLSGLNPEQREAVETLDGPVLVLAGA
GTGKTRVLTTRIAHILSQGRARPAEILSVTFTNKAAREMKHRLGQMLGHAVEGMPWLGTF
HSIGGRILRTHAELAQLKSNFTVLDTDDQVRLLKQLLQADNIDDKRWPARMLAGLIDGWK
NRGLTPSQVPSGEAAVFANGKGGKLYASYQERLKILNAADFGDLLLEDIRIFREHPDILR
QYQQRFKFILVDEYQDTNVAQYLWLRLLSQAPSKPTVPAVIPERIEEASSDVQLHVAESG
SEPAMSERAALAAAPAGPTKNICCVGDDDQSIYGWRGAEVDNILRFDHDFPGAKVIRLER
NYRSTGHILAAASHLIAHNEGRLGKTLRTEDHDGEKVTVTGSWDSEEEARGIGEEIEQLQ
RQGEKLNEVAILVRASYQMREFEDRFVTLGLPYRVIGGPRFYERAEIRDALAYLRVINSP
ADDLAFERIVNVPKRGLGDATVQMLHDHARKRRIPLFEAARAVVETDELKPKARGSLREV
VAQFDRWRAQREVTAHTDLAQIVLDESGYTEMWQKDRSADAAGRLENLKELVRSMEEFEN
LQGFLEHISLVMDRDSGADEDAVSLMTLHSAKGLEFDNVFLPGWEEGLFPSQRTLDEQGR
AGLEEERRLGHVGITRARRRAKIYFATNRRIHGTWSTTIPSRFLDELPAANVEITESKGG
SAWGGTGGYGASRFDDMEAFGSTYSTPGWQRAQANRNRGGGRTGGGSGGFEEQASTFSSS
ASSGPDFGSFSSRRRGPLTIEGELVAKSTGTTSEFALSDRVFHQKFGYGRVTRIDGNKLT
IAFDKAGEKKVVDSFVQRA
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgattcgcatgaccgagccgagcaaaatcactgacgtccccgaccaccagcccgcagcc
ggcggcatcgccgcgcgtgcgcgcgcctcggtgggcccgaaatatctgtccgggctcaat
cccgagcagcgcgaggccgtggagacgctcgacggcccggtcctggtgctggccggcgcc
ggcaccggcaagacgcgcgtgctgaccacgcgcatcgcccacatcctcagccagggccgc
gcccgtcccgccgagatcctgtcggtgaccttcaccaacaaggccgcgcgcgagatgaag
catcggctcggccagatgctcggccatgcggtcgaaggcatgccgtggctcggcaccttc
cactccatcggcggccgcatcctgcgcacccatgccgagctggcgcagctcaagtcgaat
tttaccgtgctcgacaccgacgaccaggtgcggctcttgaagcagctcctgcaagccgac
aacatcgacgacaagcgctggccggcgcggatgctggccggcctgatcgacggctggaag
aaccgcggcctgacgccgtcgcaggtgccgtcgggcgaagccgccgtcttcgccaacggc
aagggcggcaagctctatgcgagctaccaggagcggctgaagatcctgaacgccgccgat
ttcggcgatctgctgctcgaggacatccgcatcttccgtgagcatccggacatcctgcgg
cagtaccagcagcgcttcaaattcatcctggtcgacgaatatcaggacaccaacgtcgcg
caatatctgtggctgcggctgctgtcgcaggcgccgtcgaagccaactgtgcccgcagtc
attccggaacgcatcgaagaggcgagctccgacgtgcaattgcacgtcgcagaatccggc
agcgagcccgcaatgtcagagcgcgcggcattggcggctgctcctgcaggtcccaccaag
aacatctgctgcgtcggcgacgacgaccagtcgatctatggctggcgcggcgccgaggtc
gacaacatcctgcgcttcgaccacgatttccccggcgccaaggtgatccgcctcgagcgc
aactaccgctcgaccggccatatcctcgccgccgcctcgcacctgatcgcgcacaacgaa
ggccggctcggcaagacgctgcgcaccgaggaccacgacggcgagaaggtcacggtgacg
ggctcgtgggattcggaagaggaagcccgcggcatcggcgaggagatcgagcagctccag
cgccagggcgagaagctcaacgaggtcgcgatcctggtgcgcgcctcctaccagatgcgc
gagttcgaagaccgtttcgtcacgctcggcctgccctatcgcgtgatcggcggcccgcgc
ttctacgagcgcgccgaaatccgcgacgcgctggcgtacttgcgcgtcatcaactcgccg
gccgacgacctcgccttcgaacgcatcgtcaacgtgcccaagcggggcttgggcgatgcc
accgtgcagatgctgcacgaccacgcccgcaagcgtcgcatcccgctgttcgaggccgcg
cgcgcggtggtggagaccgacgagctgaagccgaaggcacgcggcagcttgcgtgaggtc
gtcgcccagttcgaccgctggcgcgcccagcgcgaggtcaccgcgcataccgatctcgcc
cagatcgtgctcgacgagagcggctacaccgagatgtggcagaaggaccgctcggcggac
gccgcgggccggctggaaaacctcaaagagctggtgcgctcgatggaggaattcgagaac
ctgcaaggattcttggagcacatctcgctggtgatggaccgcgacagcggcgccgacgag
gatgcggtgtcgctgatgacgctgcactcggccaaggggctcgaattcgacaacgtgttc
ctgcccggctgggaggaaggcctgttcccgagccagcgcacgctggacgaacagggccgc
gccggcctggaggaagagcgccggctcggccatgtcggcatcacccgcgcccgccgccgc
gccaaaatctatttcgcgaccaaccgccggatccatggcacctggtcgaccacgattccg
tcgcgcttcctggacgaattgccggccgccaatgtcgagatcacggaatccaagggcggc
tcggcctggggcggcaccggcggctacggcgcctcgcgcttcgacgacatggaggcgttc
gggtcgacctattcgaccccgggctggcagcgcgcccaggccaaccgcaatcgcggcggc
gggcgtaccggcggtggaagtggcggcttcgaggaacaggcctcgaccttctcgtcctcc
gcatcatccggacccgatttcggcagcttctcctcgcgccgccgcggccccctgaccatc
gagggggagctggtcgccaaatccaccggcacgacctcggaattcgcgctctccgaccgc
gtcttccaccagaaattcggctacggccgcgtcaccaggatcgacggcaacaagctcacc
atcgccttcgacaaggccggcgagaagaaggtcgtggacagttttgtgcagcgggcgtga
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