Bradyrhizobium xenonodulans: I3J27_36340
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Entry
I3J27_36340 CDS
T09324
Name
(GenBank) AMP-dependent synthetase/ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
bxn
Bradyrhizobium xenonodulans
Pathway
bxn00061
Fatty acid biosynthesis
bxn00071
Fatty acid degradation
bxn01100
Metabolic pathways
bxn01212
Fatty acid metabolism
bxn02024
Quorum sensing
bxn04146
Peroxisome
Module
bxn_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
bxn00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
I3J27_36340
00071 Fatty acid degradation
I3J27_36340
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
I3J27_36340
09145 Cellular community - prokaryotes
02024 Quorum sensing
I3J27_36340
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
bxn01004
]
I3J27_36340
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bxn04147
]
I3J27_36340
Enzymes [BR:
bxn01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
I3J27_36340
Lipid biosynthesis proteins [BR:
bxn01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
I3J27_36340
Exosome [BR:
bxn04147
]
Exosomal proteins
Exosomal proteins of breast milk
I3J27_36340
Exosomal proteins of breast cancer cells
I3J27_36340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
WBL78350
LinkDB
All DBs
Position
complement(7713581..7715404)
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AA seq
607 aa
AA seq
DB search
MPEPTSQPHGLAEVRTLPELLRWRIRATPAAEAYRHFDSAAGRWVGQSWQEIDAEFELWR
RALAADDFAPGERVAILMPNGIAHVAMDQAALSRGLVPVPMHAVDNPDSIAYILADSGAR
LLFVDSLERWQTIGATGQPLDRLERIVCADGAGPVPADARVVALDQWLAAAPAAAPLPDL
ALKPDDLAAIVYTSGTTGRPKGVMLSHDNIVANVKAIARRIAAAPDDVFLSFLPLSHTFE
RTGGYYYPIAAGACVAHARSVPQLAEDLRHVRPTVLISVPRIYERVYALIMQHRASAGST
ERALLDLTIAVGGRRFDARQGHGVPSLLDRLAWPLLKRLVADKVLAQFGGRLRVAVSGGA
PIAGPVIRLFLALGLDILQGYGMTETSPVVSVNTAEDNDPHSVGHVLDGIEVRLGENDEL
LVRGPSVMLGYWHKAEETRRVKDADGWLRTGDQARIENGRITITGRIKDILVTSTGEKIA
PVDLETAILADPLFEQALVVGEQRPFLTALVVLNARAWVQEKERLAAAGKQGEAETRAAL
LARIATAVKAYPSYATPRAVWWTMEPWTIAAGLLTPTLKNKRPALEHRFADEIEQIYAKK
KAAITST
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgccagagccgacaagtcaaccgcatgggctcgccgaggtgaggacgctgccggagctc
ttgcgctggcgcatccgtgcgacgccggccgccgaagcctatcgccatttcgattccgcg
gccgggcgctgggtcggccagtcctggcaggagatcgatgcggaattcgagctgtggcgc
cgggcgctggccgcggacgacttcgcgcccggcgagcgcgttgccatcctgatgccgaac
ggcattgcgcatgtcgcaatggaccaggcggcgctgtcgcgcggtctggtgccggtgccg
atgcatgccgtcgacaatcccgacagcatcgcctacatcctcgccgattccggcgcgcgc
ctgctgtttgtggattcgctggagcgctggcagacgatcggtgccaccggtcaaccgctc
gaccgtctcgagcggatcgtctgcgcggatggagccgggccggtgccggccgacgcgcgc
gtcgtcgcgctcgatcaatggctcgcggcagcaccggcggcggcaccgttgcctgacctc
gcgctgaaacctgacgatctcgcggccatcgtctacacctcgggcacgaccgggcggccg
aagggcgtgatgctgtcgcatgacaacatcgtcgccaacgtgaaggcgatcgcgcggcgc
atcgcggcggcgccggacgacgtattcctgtccttcctgccgctctcgcatacgttcgag
cgcaccggcggctattactatccgatcgcggccggggcctgcgttgcccatgcgcgctcg
gtgccgcagctcgcggaggatctgagacatgtgcggccgacggtgctgatctcggtgccg
cggatttatgagcgcgtctacgcgctgatcatgcagcatcgcgcctcggccgggagcacc
gaacgcgcgctgctcgacctcacgatcgccgtcggcgggcggcgtttcgacgcgcgacag
gggcacggggtgccgtcgctgctcgatcggctggcctggccgctgctcaagcggctcgtt
gccgacaaggtgctggcgcagttcggtggccgcctgcgcgtcgcggtctccggcggtgcg
ccgatcgccgggcccgtcattcgcctgtttcttgcactcgggctcgacatcctccagggc
tacggcatgaccgagacctcgccggtggtctccgtcaacaccgctgaggacaacgatccg
cattcggtcggccatgtcctcgacggcatcgaggtcaggctgggtgagaacgacgagctg
ctggtgcgcgggcccagcgtcatgctcggctattggcacaaggcggaggagacgcgccgc
gtcaaggacgccgacggctggctgcgcaccggcgaccaggcccgcatcgagaacgggcgc
ataaccatcaccggccgtatcaaggacatcctcgtgacgtccaccggcgagaagatcgcg
ccggtggacctggagaccgcgatcctcgccgatcccctcttcgagcaggccctggtggtc
ggcgagcagcgccccttcctcaccgcgctggtcgtgctcaacgcaagagcctgggtgcag
gagaaagaacggctcgcggcggccggcaagcagggcgaggccgagacgcgcgccgcgctg
ctcgccagaatcgcgacggcggtgaaggcctatccgtcctacgcgacgccgcgcgcggtg
tggtggacgatggagccatggaccatcgccgcagggctgctgacgccgaccttgaaaaac
aagcgtcctgcgctcgaacaccgcttcgcggacgagatcgaacagatctatgcgaagaag
aaggcggcgataacgtcgacgtga
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