KEGG   Bradyrhizobium xenonodulans: I3J27_37200
Entry
I3J27_37200       CDS       T09324                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
bxn  Bradyrhizobium xenonodulans
Brite
KEGG Orthology (KO) [BR:bxn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bxn03400]
    I3J27_37200
Enzymes [BR:bxn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     I3J27_37200
    5.6.2.6  RNA 3'-5' helicase
     I3J27_37200
DNA repair and recombination proteins [BR:bxn03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    I3J27_37200
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: WBL78512
LinkDB
Position
complement(7884046..7886634)
AA seq 862 aa
MPPRILKSPAETPVLLPDRFQAWFASRGWSPREHQLALLEKAREDASALLIAPTGAGKTL
AGFLPTLVELSTRGAERDAGAKQSLVSTGRSVQRSAGLHTLYISPLKALAVDIARNLERP
IAEMGLPIKVETRTGDTPVSRRQRQRRYPPDVLLTTPEQLALLLSSDDAPFLFSSLKRIV
LDELHALVTSKRGDLLSLGLARLWRLAPQMRAIGLSATVAEPESLARFLVPQPRDKAESA
DIVIAGGAAPPLVEMLDTRERLPWAGHSARHALPEIYELIKANKTTLVFVNTRSQAEMLF
QNLWSMNDDGLAIALHHGSLDVAQRRKVEDAMSAGRLRGVVCTSSLDLGVDWGDVDLVVN
IGAPKGSSRLMQRIGRANHRLDEASRAVLVPANRFEVLECRVAIDAIAENAQDTPPLRTG
ALDVLAQHVLSCACGEPFLSDELYGEVRTAAPYADLTRQDFDDVVDFVASGGYALKTYER
FARIKQDKEGRWRVANPKVRQSYRMNVGTIVEDDMLKVRLVRSRGGGQGKAGGSTGVIAR
GGRLLGEIEEAFIEGLSPGDTFVFSGEVVRYETLVEDQVYVSRAHDKDPKVPSYMGGKFP
LSTYLAERVRRLLDDGRAWGGLPEQVRDWLSQQKDVSRVPAVRELLVESFPRADKHYIVC
YPFEGRLAHQTLGMLLTRRLERARARPLGFVANEYAIAVWALGDLSFMIRDGRIDLDALF
DPDMLGDDLEAWLAESALMKRTFRNCAIISGLIARRHTGEEKSRRQVLFSTDLVYDVLRK
HQADHVLLRAARADAATGLLDLRRLSDMLMRIQGRITHRELDRVSPLAVPVMLEIGRESV
YGEAADELLAEAADELVKEAMG
NT seq 2589 nt   +upstreamnt  +downstreamnt
gtgccgccccgcatcctcaaatccccggccgagacgccagtattgctgcccgaccgcttc
caggcgtggttcgcgagccgcggctggtcgccgcgcgagcaccagctcgcgttgctggaa
aaggcacgcgaagacgccagcgcgctgctgatcgcgcccaccggcgccggcaagacactg
gcggggtttctgccgacgctggtggagctgtcgactcgaggagctgaacgggacgccggc
gcgaagcaaagtctcgtctccaccggtcgcagcgtgcagcgcagtgccggtctccacacc
ctctacatctcgccgctcaaggcgctcgccgtcgatatcgcgcgcaacctggagcggccg
attgccgagatggggctgccaatcaaggtcgagacccgcaccggcgacaccccggtgtcg
cggcggcagcgccagcggcgctatccgccggatgtcctgctgacgacgcccgagcagctc
gcgttgctgctctcctccgatgacgcgccgttcctgttctcctccttgaagcgcatcgtg
ctcgatgagctgcatgcgctggtgacgtccaagcgcggcgatctcttgtcgcttggcctc
gcgcggctgtggcggctggcgccgcagatgcgcgcgatcggcctgtccgcgacggtggcc
gagccggaatcgctggcgcgctttctggtgccgcaacccagggacaaagccgaatcggcc
gacatcgtcatcgccggcggcgccgcgccgccgctggtcgagatgctcgacacacgcgag
cggctgccctgggccggtcacagcgcgcgccatgcgcttcctgagatctacgagctgatc
aaggcgaacaagaccacactggtcttcgtcaacacccgcagccaggccgagatgctgttc
cagaacctctggagcatgaacgatgacgggctcgccatcgcgctgcatcacggctcgctc
gacgtcgcgcaacgccgcaaggtcgaggacgcgatgtcggcgggacgcttacgcggcgtg
gtctgcacctcctcgctcgacctcggcgtcgactggggcgacgtcgatctcgtcgtcaat
atcggcgcgcccaagggttcttcgcgtctgatgcagcgcatcggccgcgccaaccaccgc
ctcgatgaagcctcgcgcgcggtgctggtgccggcgaaccgtttcgaggtgctggagtgc
cgcgtcgcgatcgacgccatcgccgagaatgcgcaggacacgccgccgctgcggaccggc
gcgctcgacgtgctggcccagcacgtgctcagctgcgcctgcggcgagccgtttctctct
gacgagctctacggcgaagtccgcaccgccgcgccctatgccgatctgacgcgccaggat
ttcgacgacgtcgtcgatttcgtcgcctccggcggctacgcactgaagacctatgagcgc
ttcgcccgcatcaagcaggacaaggaagggcgctggcgcgtcgccaatccaaaggtgcgg
cagagctaccgcatgaatgtcggcaccatcgtcgaggacgacatgctgaaggtgcggctg
gtgcgctcgcgcggcggcggccaaggaaaagccggcggctcgaccggcgtgatcgcgcgc
ggcggcaggctgctcggcgagatcgaggaagccttcatcgagggcttgagccccggcgat
accttcgtgttcagcggcgaggtggtgcgctacgagaccctggtcgaggaccaggtttat
gtctcgcgcgcgcatgacaaggacccgaaagtgccgtcctatatgggcggcaaatttccg
ctctccacctatctcgccgagcgcgtgcgccgtctgctcgacgacggccgcgcgtggggc
ggcttgccggaacaggtgcgcgactggctgtcgcagcaaaaggacgtctcgcgcgtgccc
gcggtgcgcgagctgctggtggaaagtttcccgcgcgccgacaagcattacatcgtctgc
tatccctttgagggtcgcctcgcacatcagacgctcggcatgctgctgacgcgccgcctc
gagcgcgcccgtgcgcggccgctcggcttcgtcgccaacgaatatgcgatcgcagtctgg
gcgctcggcgacttgtccttcatgatccgcgacggccggatcgacctcgacgcgctgttc
gaccctgatatgctcggcgacgacctcgaggcctggctcgccgagtcggcgttgatgaaa
cgcacgttccgtaattgcgcgatcatctccggcctgatcgcgcgcaggcataccggcgaa
gagaagagccgccgccaggtgctgttctcgaccgatctcgtctacgacgtcctgcgcaag
catcaggccgatcatgtcctgctgcgcgccgcacgcgcggatgctgccacgggcctgctc
gatctgcgccgcctcagcgacatgctgatgcgcatccagggccgcatcacgcaccgggaa
ctcgaccgcgtttccccgctcgccgtccccgtgatgctggaaatcggccgcgagtcagtt
tatggcgaagctgcagacgagctcctggccgaagccgccgatgagctggtcaaagaggcg
atgggatag

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