Bacteroides xylanisolvens: BXY_02790
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Entry
BXY_02790 CDS
T02579
Name
(GenBank) Uncharacterized conserved protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
bxy
Bacteroides xylanisolvens
Brite
KEGG Orthology (KO) [BR:
bxy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bxy03016
]
BXY_02790
Enzymes [BR:
bxy01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
BXY_02790
Transfer RNA biogenesis [BR:
bxy03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
BXY_02790
Prokaryotic type
tRNA splicing ligases
BXY_02790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
CBK65558
UniProt:
D6D5R0
LinkDB
All DBs
Position
316336..317505
Genome browser
AA seq
389 aa
AA seq
DB search
MEKVIMGTRLPAKLWLNEVEDSCMSQIMDLTSLPFAFKHIAIMPDAHAGKGMPIGGVLAT
KGVIVPNAVGVDIGCGMCAIKTNRKADDFSYTDLTSIMSKIRAAIPLGFDHHTKKQDQEL
LPQGFDLEEMPILKNQYEACLKQIGTLGGGNHFIEIQKDTETSDVWVMIHSGSRNIGLKV
ANHYNKIAQYWNEKWYSEMVSGLAYLPMETQMAKDYFREMNYCVAFAFANRQLMMTRICE
AIQAVKPETDFEPMINIAHNYAAWENHFDQDVIVHRKGATRAYEGEIGIIPGSMGTKSYI
VEGLGNPESFKSCSHGAGRLMGRKDACRRLSLDEEKERMNQQGIIHGLRSQDELDEAPGA
YKDIAQVIANERDLVKPLVELAPMAVIKG
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagtaattatgggaacacgtttgcccgctaagctttggttgaatgaagtagaa
gactcttgtatgtcgcagattatggatttaacttcacttccttttgcgtttaaacatatc
gccatcatgcctgatgcccatgcgggaaaaggaatgccaattggcggtgtgttggctacg
aagggtgtgattgttcccaatgctgtgggagtggatatcggttgtggaatgtgtgcgatt
aagaccaatcgaaaagcggatgattttagttatacggatttgacttccatcatgtcgaag
attcgtgcggccattcccttgggattcgatcatcatactaaaaagcaagatcaggagtta
cttccacaaggattcgaccttgaggagatgcctatattgaagaatcagtacgaggcttgt
ttgaagcagataggaaccttgggaggaggaaaccactttattgagattcagaaagatacc
gaaacgtctgatgtgtgggtgatgattcactccggaagccgtaacattggtttgaaggtt
gccaatcactataataagattgcgcaatattggaatgagaaatggtattctgaaatggta
tcgggactggcttacctgccaatggagacgcagatggcaaaggattatttccgtgaaatg
aactactgtgtggcctttgcctttgctaaccgtcagttgatgatgacccgtatttgtgaa
gccatccaggctgtgaaacctgaaacggactttgagcctatgattaatattgcccacaac
tatgcagcctgggagaaccatttcgatcaggatgtgattgtgcaccgaaaaggagctacg
cgtgcctatgaaggtgagattggtattatccccggatctatgggtactaaatcctatatc
gttgaaggactgggtaatccggagagcttcaaaagctgttcgcatggtgccggccgattg
atgggacgaaaggatgcctgtcgccgtttgtcactggatgaagagaaagagcgaatgaac
cagcaaggaatcattcacggactccgttcgcaggatgaactggatgaagcgccgggagct
tataaagatattgcgcaagtgatagcgaatgagcgggatttggtgaagccgttggtggaa
cttgctccaatggcagttattaaagggtga
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