Bacteroides xylanisolvens: BXY_12040
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Entry
BXY_12040 CDS
T02579
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, Bacteroides expansion family 1
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bxy
Bacteroides xylanisolvens
Pathway
bxy02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bxy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BXY_12040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bxy03021
]
BXY_12040
Transcription machinery [BR:
bxy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BXY_12040
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
GerE
Sigma70_ECF
PhyR_sigma2
UPF0122
HTH_23
HTH_40
PF0610-like_N
HTH_20
Motif
Other DBs
NCBI-ProteinID:
CBK66348
LinkDB
All DBs
Position
1398898..1399449
Genome browser
AA seq
183 aa
AA seq
DB search
MNGNRDNIDVCFEQFYAANFPRVKNFARLLTKSEEDAEDIAQNIFLKLWTRPELWQEQET
MTGYLYTVTRNEIFNLFKHQKVEQEYEDKVLKAQLLGELCDEDSSLLENLYYKEVLMLIK
MTLSQLPDRRRQVFEMSRFEGLSHKEIADKLQIPLRTVEDHIYKTLTELRKVLMFVILFR
IFP
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgaatggaaacagagacaatatagatgtctgttttgagcagttttatgccgctaacttc
ccgagggtcaagaactttgcaaggttgttgactaaatcggaggaagatgcggaagatatt
gctcagaatatatttcttaagttatggacacgtcctgaactttggcaagaacaggaaacc
atgactggttatctctatactgtgacccggaatgaaattttcaacttgttcaagcatcag
aaggtagagcaggaatatgaagacaaagttttgaaagcccagttgttgggtgaactttgt
gacgaagattcctccctgttagaaaatctatactataaagaagtattgatgcttatcaaa
atgacactcagtcagttgcctgatcgtcgcagacaagtttttgagatgagccgttttgaa
ggactttctcataaagaaatagcagataaattgcaaatcccattacgtacggtagaagat
catatctataaaacattgaccgaacttcgcaaagtgttaatgtttgttattctcttccgg
atcttcccgtag
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