Bacteroides xylanisolvens: BXY_23980
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Entry
BXY_23980 CDS
T02579
Name
(GenBank) Excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
bxy
Bacteroides xylanisolvens
Pathway
bxy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bxy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BXY_23980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bxy03400
]
BXY_23980
DNA repair and recombination proteins [BR:
bxy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BXY_23980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
UvrC_RNaseH
GIY-YIG
HHH_5
HHH_2
DUF7508
5_3_exonuc
Ribosomal_S13
UVR
DUF6236
Motif
Other DBs
NCBI-ProteinID:
CBK67463
UniProt:
D6CZ61
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Position
complement(2939385..2941229)
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AA seq
614 aa
AA seq
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MNVEPESKTNEYLKGIVANLPEKPGIYQYLNTEGTIIYVGKAKNLKKRVYSYFSKEHEPG
KTRVLVSKIADIRYIVVNTEEDALLLENNLIKKYKPRYNVLLKDDKTYPSICVQNEYFPR
IFKTRKVIRNGSSYYGPYSHIPSMYAVLDLIKHLYPLRTCNLNLSPENIRAGKFNVCLEY
HIKNCAGPCIGLQSQEEYLKNIDEIKEILKGNTQDISRMLLEKMQTLAAEMKFEEAQKVK
EKYLLIESYRSKSEVVSAVLHNIDVFSIEEDESNSAFINYLHITNGAINQAFTFEYKKKL
NESKEELLTLGIIEMRERYKSQSREIIVPFELDLELNNIVFTVPQRGDKKKLLDLSVLNV
KQYKADRLKQTEKLNPEQRSMRLMKEIQQELHLERPPLQIECFDNSNIQGSDAVAACVVF
KKAKPSKKDYRKYNIKTVVGPDDYASMKEVVRRRYQRAIEENSPLPDLIITDGGKGQMEV
VREVIEDELNLAIPIAGLAKDNRHRTSELLFGFPPQTIGIKQQSPLFRLLTQIQDEVHRF
AISFHRDKRSKRQVASALDTIKGIGEKTKTALLKEFKSVKRIKETSFEEIAAIIGEAKAK
TVKEGLSNESSKNE
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtagaaccggaaagcaaaaccaatgaatatttgaaagggattgtagccaacctt
cccgagaaaccgggtatttaccaatacctgaatacggaaggaacgattatatacgttgga
aaggcaaaaaatctaaagaaaagagtctattcttatttcagcaaagagcatgagccggga
aagacacgagtattggtcagtaaaatcgctgatattcgctatatcgtagtcaacacagaa
gaagatgcgttattgctggagaataatctgataaagaaatataagccgcgctacaacgtt
ctgttaaaggacgacaagacctacccttctatttgcgtgcagaatgagtactttccgaga
atcttcaaaacaagaaaggttatcaggaacggttcgtcttattatggcccgtacagtcac
attccatcaatgtatgcggtattagacctgataaagcatttatatcccttgcgcacatgc
aatttaaacctaagtccggaaaacatacgggcgggcaaatttaatgtatgtctggaatat
catataaaaaactgcgccgggccatgcatcgggttgcaatcacaggaagaatatctcaaa
aacatagatgaaatcaaggaaatcctgaaagggaatacacaagatatcagccgtatgttg
ctggaaaagatgcagacgttggcagccgaaatgaagtttgaagaggcgcagaaagtgaaa
gagaaatatctcctgatagagagttaccgctccaaatcagaggtagtaagtgctgtattg
cacaatatcgatgtattctcaatcgaagaggacgagtcgaactctgctttcatcaattat
ctgcacatcacaaacggcgccatcaatcaggctttcacgttcgaatataaaaagaagctg
aacgaatcaaaagaggaacttttgacgcttggtattattgaaatgcgggaacgctataaa
agccagtccagagagattatagtgccttttgaactcgatttggagttaaacaatatcgta
tttaccgttccacagcggggagataagaagaaattgctggatctttcggttctaaacgtg
aaacagtacaaggccgaccgcctaaaacagacagaaaagctgaatccggaacaaaggagt
atgcgtttaatgaaagaaattcagcaagagttgcatttggaaagaccgccgctacaaatc
gagtgttttgataactcaaacatacagggttctgatgccgtggcagcctgtgttgtattt
aagaaggccaagccatcaaagaaagattaccggaaatacaatataaagacggttgtaggg
cctgatgactatgcttccatgaaagaggtcgtcagaaggcgttatcaacgcgctatcgaa
gagaattctcctctacccgacctgattatcactgatggcggaaaaggtcaaatggaggtc
gtcagagaagtcattgaagacgaactgaatctggctattcctattgccggactggcaaag
gacaaccgccaccgcacatcggagctgctttttggatttcctccgcagacgattggtatc
aaacagcaaagcccattattccgtctgctgacacagattcaggatgaagtacaccgtttt
gctattagtttccatcgtgataaacgcagcaaacgacaagttgcgtccgcactggatacc
atcaaaggtatcggagaaaagacaaaaacagcacttttgaaagagtttaagagcgtaaaa
cgaataaaagaaacctcttttgaggagattgccgctatcatcggagaagcgaaagccaag
accgtaaaagagggattaagcaatgaatcatcaaaaaatgaataa
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