Bacteroides xylanisolvens: BXY_25340
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Entry
BXY_25340 CDS
T02579
Name
(GenBank) Holliday junction DNA helicase subunit RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
bxy
Bacteroides xylanisolvens
Pathway
bxy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bxy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BXY_25340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bxy03400
]
BXY_25340
Enzymes [BR:
bxy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BXY_25340
DNA repair and recombination proteins [BR:
bxy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BXY_25340
RecFOR pathway proteins
BXY_25340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_3
AAA_22
AAA_16
Mg_chelatase
TIP49
nSTAND3
TsaE
AAA_14
NB-ARC
AAA_18
Rad17
AAA_PrkA
NTPase_1
RNA_helicase
NPHP3_N
AAA_28
AAA_33
ABC_tran
DUF815
AAA_17
bpMoxR
AAA_24
Sigma54_activ_2
NACHT
Motif
Other DBs
NCBI-ProteinID:
CBK67583
UniProt:
D6CZI1
LinkDB
All DBs
Position
3075474..3076505
Genome browser
AA seq
343 aa
AA seq
DB search
MEQEDFNIREHQLTSKERDFENALRPLSFEDFSGQDKVVENLRIFVKAARLRGEALDHVL
LHGPPGLGKTTLSNIIANELGVGFKVTSGPVLDKPGDLAGVLTSLEPNDVLFIDEIHRLS
PVVEEYLYSAMEDYRIDIMIDKGPSARSIQIDLNPFTLVGATTRSGLLTAPLRARFGINL
HLEYYDDDILSNIIRRSASILDVPCSVRAASEIASRSRGTPRIANALLRRVRDFAQVKGT
GSIDTEIAQFALEALNIDKYGLDEIDNKILCTIIDKFKGGPVGITTIATALGEDAGTIEE
VYEPFLIKEGFMKRTPRGREVTELAYKHLGRSLYNSQKTLFND
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggaacaggaagattttaacatacgcgaacatcagcttacttcaaaagaacgggatttc
gagaatgcactccgtccgttaagttttgaagactttagcggccaggacaaggtggtggaa
aaccttcgcatttttgtgaaggcggcacgtctgcgcggcgaagcacttgaccatgtgcta
ttgcatggtcctcccggattaggaaaaacaactctttcaaatattatcgccaacgaattg
ggagtcggctttaaagtaacttccggtccggtgctagataaaccgggtgacctggcaggt
gtattgaccagcctcgaaccgaacgacgtgctttttattgatgaaattcatcgtctgtcg
cccgtagtggaagaatatctttattcggccatggaagattaccgcatcgatattatgatt
gataagggaccttcggcacgcagtatccagatcgatttgaatcctttcacgttggttggt
gcaaccacgcgtagcggtctgctgacggctccgcttcgtgcacgtttcggtattaacctt
catttggagtattatgacgatgatattttgagcaatatcatccgtcgttctgcgtccata
ctggatgtgccttgctcggtacgtgcagcctcggagattgcttcccgcagtcgtgggaca
ccccgtattgccaatgctttgcttcgccgggtacgtgacttcgcacaggtgaaaggcacc
ggctctatcgatacggagattgcccagtttgcgctggaggcattgaatatcgacaagtac
ggactggatgagatagacaacaagatactttgtaccattatagacaagtttaaaggcggc
cctgtcggtataacgaccattgctacggctttgggagaagatgcgggaaccatcgaggaa
gtttacgaacctttcctgataaaagaaggattcatgaaacgtactccccgcggacgcgag
gtaaccgaacttgcctataagcatttgggaagaagtctttataacagtcagaaaacactg
tttaatgactga
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