Bacteroides xylanisolvens: BXY_25390
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Entry
BXY_25390 CDS
T02579
Name
(GenBank) Superfamily II DNA and RNA helicases
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bxy
Bacteroides xylanisolvens
Pathway
bxy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bxy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BXY_25390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bxy03019
]
BXY_25390
03009 Ribosome biogenesis [BR:
bxy03009
]
BXY_25390
Enzymes [BR:
bxy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BXY_25390
Messenger RNA biogenesis [BR:
bxy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BXY_25390
Ribosome biogenesis [BR:
bxy03009
]
Prokaryotic type
rRNA helicases
BXY_25390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
CMS1
Ig_Tie2_1
RecG_N
Motif
Other DBs
NCBI-ProteinID:
CBK67588
UniProt:
D6CZI6
LinkDB
All DBs
Position
complement(3082489..3084414)
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AA seq
641 aa
AA seq
DB search
MKTFEELGVSPEIRRAIEEMGYENPMPVQEEVIPYLLGENNDVVALAQTGTGKTAAFGLP
LLQQIDVKNRIPQSLILCPTRELCLQIAGDLNDYSKYIDGLKVLPVYGGSSIDSQIRSLK
RGVHIIVATPGRLLDLMERKTVSLSTIHNVVMDEADEMLNMGFTESINAILADVPQERNT
LLFSATMSPEIARISKNYLRNAKEITIGRKNESTNNVKHVVYTVQAKDKYEALKRIVDYY
PQIYGIIFCRTRKETQEIADKLMQEGYNADSLHGELSQAQRDAVMQKFRIRNLQLLVATD
VAARGLDVDDLTHVINYGLPDDTESYTHRSGRTGRAGKTGTSIAIINLREKGKMREIERI
ISKKFIVGEMPTAAGICQKQLIKVIDDLEKVKVNEEEIADFMPEIYRKLEWLSKEDLIKR
MVSHEFNRFAEYYRNRPEIEQPTDMRAERAGRGDRKEGGFEKRSRKAAPGFNRLFINLGK
TDSFFPSDLIGLLNSNTRGRIELGRIDLMQNYSFFEVPEKEATNVIKALNKAKWNGRKVV
IEIAGEESGKGRESSSNERKGGKRFGGKSDERAPRYENKDRKSKDASAKGAKSAKKDKPS
RAERGYSDARGPKKKDDWQEFFKDKEPDFSEEGWARRKPKK
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgaagacatttgaagagcttggcgtttctccggagatacgtagagcaattgaagaaatg
ggatacgagaatcccatgccggtacaagaggaagtgattccgtaccttttaggagaaaat
aatgatgtagtagctcttgcacagacaggaacaggtaaaacagccgcattcggtttgccc
ttgctccaacagattgacgtaaaaaacagaattccacaatcgcttatcctctgccctacc
cgcgagctttgtctccagatagcaggagatctaaacgactattccaaatacattgacgga
ctgaaagtgctgcctgtatatggtggttcttccattgatagccaaatacgcagcctgaaa
cgaggtgtacatatcatcgttgccacaccgggacgtctgctggacttgatggagcgcaaa
accgtatctttatctaccatccacaacgttgtaatggatgaagcggacgaaatgcttaat
atgggattcacagagagtatcaatgccatcctggctgatgtgccgcaggaacgtaacact
ctactgttttctgcaacaatgagcccggaaatcgcacgtatctccaagaactacttacgt
aacgcgaaagaaataactattggccgtaagaatgaaagtaccaacaacgttaaacacgtt
gtttataccgtacaggctaaagataaatatgaagctttaaaacgtatcgtcgattactac
ccacaaatatacggtatcattttctgccgtacccgtaaagagactcaagaaattgcagac
aaattgatgcaggaaggttacaatgccgattctttacatggcgaactttcccaagcacaa
cgggatgccgttatgcagaaattccgcatccgtaatctgcaactgctcgttgcaactgac
gtggctgcccgtggacttgacgtagacgatctgacacatgtcatcaattacggattgcct
gacgacacagaaagctatacacatcgtagcggacgtacagggcgtgccggaaaaaccgga
acttccattgccatcatcaacctccgcgaaaagggaaagatgagagaaatcgaacggatt
atcagcaaaaaatttattgtcggagaaatgccgacagcggcaggtatctgtcaaaaacag
ctgattaaggtaattgatgatctcgaaaaagtaaaagtgaacgaagaagagattgccgac
tttatgccggaaatctatcgcaaactggaatggctaagcaaagaggacttgattaaacga
atggtttctcacgaattcaaccgttttgcagaatattaccgcaaccgtcctgaaatagag
caaccaaccgatatgcgtgcagaacgcgccggacgtggtgatcgtaaagaaggaggtttc
gagaaaagaagccgaaaagctgctccaggcttcaaccgcttatttatcaatctgggtaaa
acggacagcttctttccaagtgatcttatcggactgttgaacagcaatacaagagggcgc
attgaattgggacgcattgacctgatgcagaactattctttctttgaagtacccgaaaag
gaagcgaccaatgtaattaaagcgctgaacaaagctaaatggaacggacgtaaggtcgtt
attgaaatagccggtgaagaaagcggaaaaggacgcgaaagcagttctaatgagcgtaag
ggaggtaaacgattcggcggcaaaagtgacgaacgtgcaccacgctatgagaataaggat
agaaaatcgaaagatgcttctgcaaaaggtgctaaatcagctaaaaaagataaacctagt
cgtgcagaacgaggttattctgatgcccgtggtccaaaaaagaaagatgactggcaagaa
tttttcaaagacaaagagcctgacttcagcgaggaaggatgggcacgtagaaaacccaaa
aagtaa
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