Bacteroides xylanisolvens: BXY_30510
Help
Entry
BXY_30510 CDS
T02579
Name
(GenBank) exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bxy
Bacteroides xylanisolvens
Pathway
bxy03410
Base excision repair
bxy03430
Mismatch repair
bxy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bxy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BXY_30510
03430 Mismatch repair
BXY_30510
03440 Homologous recombination
BXY_30510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bxy03400
]
BXY_30510
DNA repair and recombination proteins [BR:
bxy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BXY_30510
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BXY_30510
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BXY_30510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
CBK68066
UniProt:
D6D0W4
LinkDB
All DBs
Position
complement(3778018..3779736)
Genome browser
AA seq
572 aa
AA seq
DB search
MNHKWNYRPITPEQAETSQTLAQELGISPILGQLLVQRGITKAADAKKFFRPQLPDLHDP
FLMKDMDIAVERLNRAMGKKERILIYGDYDVDGTTAVALVYKFIQQFYSNLDYYIPDRYN
EGYGISKKGVDYAAETGVGLIIVLDCGIKAVEEITYAKEKGIDFIICDHHVPDDILPPAV
AILNAKRLDNTYPYTHLSGCGVGFKFMQAFAISNGIEFHHLIPLLDIVAVSIASDIVPIM
GENRILAYHGLKQLNSNPSIGMKAIIDVCGLSEKEITVSDIVFKIGPRINASGRIQNGKE
AVDLLTEKDFSAALEKAGQINQYNETRKDLDKSMTEEANNIVANLEGLADRRSIVLYNEE
WHKGVIGIVASRLTEVYYRPAVVLTRTDDMATGSARSVSGFDVYKAIEHCRDLLENFGGH
TYAAGLSMKVENVDAFTKRFEDYVSRHILPEQTSAVIEIDAEIDFRDISSKFFNDLKKFN
PFGPDNTKPIFCTHHVYDYGTSKVVGRDQEHIKLELVDNKSNNVMNGIAFGQSSHVRYIK
TKRSFDICYTIEENTHKRGEVQLQIEDIKPIE
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgaatcacaaatggaattatcgacccattacacccgaacaggcagagacaagccagaca
ttggcccaggaattagggattagcccgattcttggacaacttttggtacagcggggaatt
acgaaggcagcagatgccaagaagtttttccgcccgcagttgcccgacctgcacgatccg
ttcctgatgaaggatatggatattgcagtagaacgtctgaacagggcgatgggaaagaaa
gaacgtattctaatttatggagattatgacgtagacggtactactgccgtggcattggtc
tacaagtttattcaacagttctattcgaaccttgattattacatacccgaccgctacaac
gaagggtatggcatttctaaaaaaggagtggactacgccgctgaaaccggtgtgggactg
attattgtactcgattgcggaataaaagcagtagaggaaatcacgtatgccaaagaaaaa
gggattgactttatcatctgcgaccatcacgtaccggatgatattctcccgcctgccgta
gctatattgaacgccaaacgcctggacaacacgtacccgtacacccacctttccggttgt
ggagtcggtttcaagtttatgcaggcgttcgccattagtaacggtatcgaattccatcat
ctgattccgttgctcgacatcgtagccgtgagtatcgcatcggacatcgttccgattatg
ggtgaaaaccgtattctcgcctaccacggtctgaaacaactgaacagtaacccgagtatc
ggcatgaaggccattatcgatgtatgcggactttctgaaaaagaaattactgtcagcgat
attgtgtttaaaatcggaccgcgcatcaatgcatcgggacgtattcagaatgggaaagaa
gctgtagacttgctaacggaaaaagatttctcggcggcacttgagaaagccggacaaatc
aaccagtacaacgaaacccggaaagacctcgacaagagtatgacggaggaagcaaacaac
atcgttgccaatctggaaggattagccgaccgccgctctattgtgctctacaacgaagaa
tggcacaaaggagtgatcggtatcgtagcttcccgtctgacggaagtgtattaccgccct
gccgtggtactgacacgaacggatgacatggcgacaggctccgcacgttctgtttccggc
ttcgatgtatataaagcaatcgagcattgccgcgacctgctggaaaacttcggaggacat
acatacgccgccggactatcaatgaaagtggagaatgtggatgcttttaccaaacggttc
gaagactacgtttcacggcatatcctaccggaacaaaccagtgccgtcatcgagattgat
gctgaaatcgacttcagggatatttcgtccaagttcttcaacgacctgaagaaatttaat
cctttcggccccgacaacacgaaacccattttctgcactcatcacgtctatgattatgga
acgagtaaagtagtgggacgcgaccaggaacatatcaagctcgaactggttgataataaa
tcgaataatgtaatgaacggtatcgcgttcggacagagttcgcacgtgcgctatatcaaa
acaaaacgttcgttcgacatctgttacaccattgaagaaaacacgcataagcgtggcgaa
gttcaacttcaaatcgaggatataaagccgattgaataa
DBGET
integrated database retrieval system