Bacteroides xylanisolvens: BXY_34890
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Entry
BXY_34890 CDS
T02579
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, Bacteroides expansion family 1
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bxy
Bacteroides xylanisolvens
Pathway
bxy02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bxy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BXY_34890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bxy03021
]
BXY_34890
Transcription machinery [BR:
bxy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BXY_34890
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
Sigma70_r2
HTH_30
HTH_10
HTH_Tnp_ISL3
HTH_AsnC-type
HTH_38
GerE
HTH_24
HTH_23
HTH_28
DUF2774
HTH_11
HTH_40
HTH_20
Clathrin
CDI_Immunity_Comp
UPF0122
Xre-like-HTH
HTH_8
HTH_Mga
HTH_3
DUF6362
LPD38
Motif
Other DBs
NCBI-ProteinID:
CBK68480
LinkDB
All DBs
Position
complement(4390254..4390829)
Genome browser
AA seq
191 aa
AA seq
DB search
MKGTYQSDNDFLLSAVQRGDQKAFDTLFRRYYPMLCAYGHRFVELEDAEEIVEDSLLWIW
ENRETLVIESSLNSYLFKMVYRRALNKLAHIDATQRADTRFYEEMQEMLQDTDYYQIEEL
AKRIEDAVAALPESYREAFVMHRFRDMSYKEIAETLGVSPKTIDYRIQQALKQLRVDLKD
YLPLLLPLLFP
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggaacttatcaatcagacaatgattttctattatcagccgttcaacgcggagat
caaaaagcattcgatacactgtttcggagatattatccgatgctgtgcgcgtatggtcac
cggtttgtcgagttggaagatgcagaagagattgtagaggattctcttttatggatttgg
gaaaatcgggaaacactggttatcgagtcctctcttaattcttatctttttaagatggtg
tatcgcagggctttgaacaagcttgcacatattgatgccacccaacgggcggatacccgc
ttttatgaagaaatgcaggaaatgctgcaagatacggactattatcagattgaagaactt
gcaaaacggattgaagatgctgtcgcggcactgcccgaaagttatcgggaagcttttgtg
atgcaccgattccgggatatgagttacaaggagattgcagaaacactgggggtatcgccc
aaaacaatagattaccgtattcaacaagcgttaaagcaactgcgcgtggatttgaaagat
tacctcccgttactactacctctcttatttccctag
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