Bacillus velezensis YAU B9601-Y2: BANAU_0422
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Entry
BANAU_0422 CDS
T02050
Symbol
deaD1
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bya
Bacillus velezensis YAU B9601-Y2
Pathway
bya03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bya00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BANAU_0422 (deaD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bya03019
]
BANAU_0422 (deaD1)
03009 Ribosome biogenesis [BR:
bya03009
]
BANAU_0422 (deaD1)
Enzymes [BR:
bya01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BANAU_0422 (deaD1)
Messenger RNA biogenesis [BR:
bya03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BANAU_0422 (deaD1)
Ribosome biogenesis [BR:
bya03009
]
Prokaryotic type
rRNA helicases
BANAU_0422 (deaD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
CMS1
Motif
Other DBs
NCBI-ProteinID:
CCG48444
LinkDB
All DBs
Position
467386..468870
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AA seq
494 aa
AA seq
DB search
MTITFQDFQLSSDLMKSINRMGFEEATPIQAQTIPLGLLNKDVIGQAQTGTGKTAAFGIP
LVEKMNPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRAKVLPIYGGQDIGRQIRALKK
NPHIIVGTPGRLLDHINRRTIRLNNVNTVVMDEADEMLNMGFIDDIESILSNVPSDHQTL
LFSATMPAPIKRIAERFMTEPEHVKVKAKEMTVSNIQQFYLEVQERKKFDTLTRLLDIQS
PELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLTQAKRMVALRKFKEGAIEVLVATDV
AARGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGMAMTFITPREKSMLRAIEQTT
KRKMDRMKEPTLDEALEGQQQVTVDRLRTAISENNLNFYMTAAAELLEDHDAVTVVAAAI
KMATKEPDSTPVRLTDEAPMVSKRYKNQRTSKRRDGQGGGYRGGKGKNNNRSSYDKKRSS
DRRSSGDRRQKKSY
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
ttgactataacgtttcaagatttccaattaagttctgatctcatgaaatcaatcaatcgt
atgggatttgaagaagcaacaccgatccaggcacaaacgattccgctcggacttttaaat
aaagatgtcatcggacaagcgcaaacaggtacaggtaaaacagctgcgttcggtataccc
cttgttgaaaaaatgaaccccgagtctcctaatattcaagcaatcgtaatcgcgccaacc
cgtgaattagccattcaagtatctgaagagttatataaaatcggacaagataagcgtgcg
aaagtactgcctatttacggcggccaggatatcggacgtcaaatccgcgcattgaagaaa
aacccgcatatcatcgtaggtacgccggggcgtcttcttgaccatatcaaccgccgcacg
atccgtttaaataacgtgaacacggttgtcatggatgaggctgatgaaatgctgaacatg
ggattcattgatgacattgaatccattctctcaaacgtgccgagcgaccaccaaacgctc
ttattctcagcaacaatgcctgcgccgatcaaacggatcgcagagcgtttcatgactgag
ccggaacacgtaaaagtaaaagcgaaagaaatgactgtgtccaacattcagcagttctac
ttggaagtgcaggagcgcaaaaaattcgatacgctgactcgtcttcttgacattcagtct
ccggaacttgcgatcgtattcggacgtacgaaacgccgtgtcgatgagcttgctgaagcc
ctgaaccttcgcggatatgcggctgaaggaattcacggcgacttaacgcaggcgaaacgt
atggttgcgcttcgcaagtttaaagaaggtgcgatcgaagtgcttgtagcgactgacgtt
gccgcccgcggacttgatatctcaggcgttacccacgtttacaactttgacgtgcctcaa
gatcctgaaagttacgttcaccgtatcggaagaacgggccgtgcaggaaaaacgggtatg
gcgatgacgtttatcacaccgcgtgagaaaagcatgcttcgcgcgattgaacaaacgaca
aaacgcaaaatggaccgcatgaaagagccgacgcttgacgaagcattagaaggacagcag
caggtgacggttgaccgtctgcgcacggcgatcagcgaaaacaacctgaacttctacatg
acggcagctgcggaattgttagaagatcatgatgcagtgacagttgtggctgcagccatt
aaaatggcgacaaaagagccggacagcacgcctgtacgcctcactgatgaagcgcctatg
gtcagcaaacgctataaaaaccagcgtacttctaagcgcagagacggccaaggcggcggc
taccgcggcggcaaagggaaaaacaacaaccgttcttcctacgataaaaaacgctcaagc
gaccgccgttcttcaggtgacagacgccagaaaaaatcatactaa
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