Bacillus velezensis YAU B9601-Y2: BANAU_2161
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Entry
BANAU_2161 CDS
T02050
Symbol
xpf3
Name
(GenBank) positive control sigma-like factor
KO
K24072
positive control factor
Organism
bya
Bacillus velezensis YAU B9601-Y2
Brite
KEGG Orthology (KO) [BR:
bya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bya03021
]
BANAU_2161 (xpf3)
Transcription machinery [BR:
bya03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BANAU_2161 (xpf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
GerE
UPF0122
HTH_38
HTH_23
HTH_17
HTH_68
HTH_Tnp_ISL3
Sigma70_ECF
MarR_2
HTH_40
Phage_antitermQ
DUF134
HTH_Crp_2
HTH_36
HTH_24
HTH_10
Motif
Other DBs
NCBI-ProteinID:
CCG50182
UniProt:
I2C6U2
LinkDB
All DBs
Position
complement(2356128..2356643)
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AA seq
171 aa
AA seq
DB search
MQDLIIEYKRALRETRKMYRLYKDTAEVDLTAEQINDKKIISSMISDIEFTLEWLQNGRQ
PGARRGADRRDAYQRTILADPSLIDALSEEYAIVQEAEGKVSDWEKERIADALSVLTERE
KDIFMMHAVQNMSFEEIAQLLGIKKGTVQKNIERSRLKMKNRADHSLFCLA
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgcaagatttaatcattgaatacaaacgagctttaagagaaacaagaaaaatgtaccgg
ctctacaaagatacggctgaagtcgatctgacggctgaacagattaacgacaaaaagatt
atcagtagtatgatcagcgatattgaattcactctcgaatggctgcagaacggaagacag
cccggcgcccgccgaggtgctgacagaagagacgcatatcaaaggacgattcttgctgat
ccgagcttaattgatgcgctgtcggaagaatacgcaatcgttcaagaagctgaaggaaag
gtaagtgattgggagaaggaaagaatcgctgatgccctttccgttctcacagaaagagaa
aaagacatattcatgatgcatgctgtgcaaaacatgtctttcgaagagatagcgcagtta
ttggggattaaaaaaggaactgtgcagaagaacattgaacgttcccgtctgaaaatgaaa
aatagagcagatcacagcctattctgtttagcgtga
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