Bacillus velezensis YAU B9601-Y2: BANAU_3962
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Entry
BANAU_3962 CDS
T02050
Symbol
ydfD
Name
(GenBank) transcriptional regulator, GntR family
KO
K18907
GntR family transcriptional regulator, regulator for abcA and norABC
Organism
bya
Bacillus velezensis YAU B9601-Y2
Module
bya_M00700
Multidrug resistance, efflux pump AbcA
Brite
KEGG Orthology (KO) [BR:
bya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bya03000
]
BANAU_3962 (ydfD)
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
bya01504
]
BANAU_3962 (ydfD)
Transcription factors [BR:
bya03000
]
Prokaryotic type
Helix-turn-helix
GntR family
BANAU_3962 (ydfD)
Antimicrobial resistance genes [BR:
bya01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AbcA [MD:
M00700
]
BANAU_3962 (ydfD)
Multidrug resistance, efflux pump NorB [MD:
M00702
]
BANAU_3962 (ydfD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
Asp_aminotransf
HTH_36
HTH_11
HTH_Crp_2
MarR_2
HTH_41
HTH_24
MarR
Motif
Other DBs
NCBI-ProteinID:
CCG51982
UniProt:
I2CCD1
LinkDB
All DBs
Position
complement(4215442..4216890)
Genome browser
AA seq
482 aa
AA seq
DB search
MSAPEEKKMKKLPKYIQIIQFIKEKIGNGEWPIGSKIPSQRTLAKHFEVNRSTVITALEE
LTADGLIEGRMGKGTVVTNNTWTLLAKNSAPDWDQYVTSGIQQPSQKIVQEINKSESNSD
LIQLSKGELSHEIFPLAAMKKMMGKVSQNIEAFGYEEPKGYLPLREALSGYLRTIGIQAS
SSSILIVSGALQALQLISMGLLQRGSTVYLDQPSYLYSLHVFQSAGMKLTGVPMDNDGLL
PEHIHMARGERGRAILYTNPCFHNPTGILMSKKRREEILAASENAQLPIIEDDIYRELWI
DEIPPDPIKTIDKNGHVLYIGSLSKTLSPGLRIGWIVGPEPVIERLSDIKMQTDYGSSSL
SQRVAAEWFTSGEYQQHLEQVRSQLKVRRQLVMSLLETNLKNVATWNMPKGGFFVWVKIL
PSLSMKLLYTKALTKGILLNLGSIYAQEKGNYIRLSYAYASLEDLQKGIYELGLMIKELA
SR
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctccagaagaaaaaaagatgaaaaagcttcctaagtacatacaaatcattcaa
tttataaaagagaaaataggaaatggagaatggccgattggaagtaagattccaagccag
cgcacgcttgccaaacactttgaggtgaacaggagcacagtcattacagctttagaggaa
ttgacggcggatggattaatcgaaggcagaatgggcaaagggacagttgttacgaacaat
acatggacacttttggctaagaattccgcccccgattgggatcagtatgtaacctccgga
atccagcagccaagccaaaaaatcgttcaagagatcaataaatcagaatcaaattccgat
cttatacagctcagtaaaggagaactttcacatgagatttttcctttagctgctatgaaa
aagatgatgggaaaggtatctcaaaacatagaggcattcgggtatgaggaaccaaaagga
tatttgcctttgagagaggcattaagcggctatttaagaacaatcggtattcaagcttca
tcttcttccattcttattgtttctggagcgctgcaagccttgcagctgatatcaatgggg
cttttgcaaaggggatcgaccgtttatcttgaccagccttcctatctttattcattacac
gtatttcaatcagccggtatgaagctgactggagttcctatggataatgatggacttttg
ccggaacatatccacatggcaaggggggaacggggaagggctattttatatacaaatcct
tgttttcataatccgacaggtattttaatgtcaaaaaagaggcgagaagaaatccttgcg
gcaagtgagaatgcacagcttcccattattgaagatgatatttatcgtgagttatggatc
gatgaaattcctccagatcctattaaaacaatagataaaaatgggcatgtgctttacata
ggcagtttatcgaaaacattaagtccgggtttgaggattggatggatcgtcgggccggaa
ccagtgattgaacgtttatccgacataaaaatgcaaacagattacggctccagttcgtta
tcccagagagtagcggcagagtggtttacatccggtgaataccagcagcatctagaacag
gtgagaagtcaattaaaggtgagaagacaattggtcatgagtctcttagaaaccaatttg
aagaatgtcgctacatggaatatgccgaagggaggattctttgtctgggtaaaaatattg
ccttcactatctatgaaattactttatacaaaagctttgacaaaagggatacttctcaat
ctcggcagtatctatgctcaagaaaaagggaactatattcgcttatcatatgcttatgca
tctcttgaagaccttcaaaagggaatttatgaattgggtttgatgattaaggaattggca
agcagataa
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