Burkholderia sp. YI23: BYI23_A000080
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Entry
BYI23_A000080 CDS
T01711
Symbol
dbpA
Name
(GenBank) ATP-independent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
byi
Burkholderia sp. YI23
Brite
KEGG Orthology (KO) [BR:
byi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
byi03009
]
BYI23_A000080 (dbpA)
Enzymes [BR:
byi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
BYI23_A000080 (dbpA)
Ribosome biogenesis [BR:
byi03009
]
Prokaryotic type
rRNA helicases
BYI23_A000080 (dbpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
CMS1
Cas3-like_C_2
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
AET87846
LinkDB
All DBs
Position
1:10046..11428
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AA seq
460 aa
AA seq
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MTTDTSFASLPLSPAMQSNLQQLGYLSMTPIQAASLPPALAGHDLIAQAKTGSGKTAAFT
LPLLSKLDSSRFAVQALVLCPTRELADQVTQEIRRLARAEDNVKVLTLCGGTPMRPQIAS
LEHGAHIVVGTPGRIMDHLQRETLSLDAVRTLVLDEADRMLDMGFFDDIASVARQCPKDR
QTLLFSATYPEGIAKLSQQFLRNPREVKLTEQHSNAKIKQRFYQVEDHERLHAVGLLLDH
YRPVSTLAFCNTKQQCRDLLDVLRAQGFEALTLHGELEQRERDQVLVQFANRSCSVLVAT
DVAARGLDIAQLEAVINVDVTPDPEVHVHRIGRTGRAGEEGWALSLASMDEMGRVGAIEE
AQRKEVEWHPLDELTSAEPGHLKPPMATLQILGGRKDKIRPGDVLGALTGEAGFDGKQIG
KINVMDMVTYVAVERTAADDAVRKLSVGKLKGRKVKVRRM
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccgacacctccttcgccagcctgccgctttcgcccgcgatgcagtcgaatctg
cagcaactcggctatctgtcgatgacgccgatccaggccgcgagcctgccgcccgctctc
gcgggccacgatctcatcgcgcaggcgaaaaccggcagcggcaagacggcggcgttcacg
ctgccgctgctatcgaaactcgattcgagccggttcgccgtgcaggcgctcgtgctctgc
ccgacgcgcgaactcgccgatcaggtcacgcaggaaatccgccgcctcgcgcgcgcggag
gacaacgtgaaagtgctgacgctgtgcggcggcacgccgatgcgcccgcagatcgcgagt
ctggagcatggcgcgcatatcgtcgtcggcacgccgggccgcatcatggatcacttgcag
cgcgagacgctctcgctcgatgccgtgcgcacgctcgttctcgacgaagccgatcgcatg
ctggacatgggcttcttcgacgacatcgcgtccgtcgcgcggcagtgtccgaaggaccgt
cagacgttgctgttttcggcgacgtatccggaaggcatcgcgaaactgagccagcagttc
ctgcgcaatccgcgcgaggtcaagctcaccgaacagcacagcaacgcgaagatcaagcag
cgcttctatcaggtcgaggatcacgagcgcctgcatgcggtggggttgctgctcgatcac
tatcgcccggtgagcacgcttgcgttctgcaacacgaagcagcaatgccgcgatctgctc
gacgtgttgcgcgcgcaaggcttcgaggcgctgaccctgcatggcgagctggagcaacgc
gagcgcgatcaggtgctcgtgcagttcgcgaaccggagttgctccgtgctcgttgccacc
gatgtcgccgcgcgcggtctcgacatcgcgcaactggaagcggtgatcaacgtcgacgtg
acgcccgatccggaagtgcatgtgcaccgcatcggccggacggggcgcgcgggcgaagaa
ggctgggcgctgtcgctcgcgagcatggacgagatgggccgcgtcggcgcgatcgaagag
gcgcagcgcaaggaagtggagtggcatccgctcgacgagctgacgtcggcggaaccggga
cacctgaagccgccgatggcgacgctgcaaatcctcggcggccgcaaggacaagatccgc
ccgggcgacgtgctcggcgcgctcaccggcgaagcgggcttcgacggcaagcagatcggc
aagatcaacgtgatggacatggtcacgtacgtggctgtcgaacgaaccgccgccgatgac
gccgtgcgcaaactgagcgtggggaagctaaaaggccgcaaggtgaaagtgcggcgcatg
tag
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