Burkholderia sp. YI23: BYI23_A003130
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Entry
BYI23_A003130 CDS
T01711
Name
(GenBank) diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
Organism
byi
Burkholderia sp. YI23
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS_4
PAS
PAS_8
PAS_3
Motif
Other DBs
NCBI-ProteinID:
AET88151
LinkDB
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Position
1:349576..352698
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AA seq
1040 aa
AA seq
DB search
MTRFLSRGLLVNIAVVLAALGANAFVACERIGGLRDSDARTLRSMSLLRDLAAYRGSLGE
SLTQLSRFEATGIADTEARHQERVAHLDALESGLRAQFAMEPGLSAAFDALAARAAVMRR
DADQAFEKAKRARPDDSRAWADAAFVTLGEDQQAVDEEIAAMRTRIDNATISALDESAQA
SSGTMLLLVFTMLAGSGVLIYLFASHERQSREKLGVVRARQRSNERFRGMFEAHPVPMWI
VDRETMRFIAVNPAAIARFGFNEPEFMNMTLRDLHHADDFDSFAARLARSGRETGDGPMS
AISGQGPAGVWRYRCKDGSIVSADVSHHALAYSNRPGIFMLANDVTDRINAEAEARRSNE
MLEAVIDNIPQRVFWKDRELRYLGCNNAFARDAGLAYNEQVIGKTDYELPWSALADVVRA
DDEEVIVTTVPKMHHERDIVMGDELRTVVSSKLPLLDGEGQTIGILGSYHDVTDHKRAEL
ALRLQSRALDASVNAILITGVVDGANVIEYANPAFKRITGYDPSEVIGHDCRFLHGPDGD
QDGLTAIRRALAVNTEASVVVRNYRKDGALFWNQLFVAPVPNAQGLTTHHIGIINDVTDL
MRYQEELEYQANYDTLTRLPNRNLLRDRLQHAIETARRRETKIAVVFMDLDGFKNVNDSL
GHSVGDRLLAVIADRLARSARSSDTVARHGGDEFVVVLPDLTDEAGLIAWMERTRAAISE
PVWLDDTELYVGCSMGASLFPQDGDDAETVMKKADLAMYRAKDMGRNTYQFYQPEMNASV
GARMNLERRLRRALRDGEFLLHYQPQVDMTTRAIVGIEALVRWLDPEQGLVSPASFIPVA
EESGLIGPLSEWVLREACRQNKAWQDAGLPPARVSVNLSARHFQQRNIARLVTSVLEETG
LAPRYLELELTESAIMRNAEEAITMLSELSALGIGIAIDDFGTGYSSLSYLKRFPVHRLK
IDRSFVADIGASSDDETITSAIIALAHSLELQVIAEGVETHAQHDFLRERDCDEMQGYLF
SRPMPHEAIPGLLQQGVLPH
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgacccgattcctctccagaggtttgctcgtcaacatcgccgtcgttctggccgcgctc
ggcgcgaatgcgttcgtcgcgtgtgaacgcatcggcggattgcgcgacagcgacgcccgc
acgttgcgctcgatgagcctcctgcgcgatctcgcggcgtatcgcggctcgctcggcgaa
tcgctcacgcaactgagccgtttcgaagcaaccggcatcgccgacaccgaagcgcgtcat
caggagcgcgtcgcgcatctcgatgcgctcgaaagcggcctgcgcgcgcaattcgcgatg
gagcccggcctgagcgccgccttcgatgcgctcgctgcacgcgccgccgtgatgcgccgt
gacgccgatcaggcgttcgagaaggcgaagcgcgcccgccccgacgactcccgcgcctgg
gccgacgccgcgttcgtcacgctgggcgaagatcagcaggccgtcgacgaagaaatcgcc
gccatgcgcacgcgcatcgacaacgcgacgatcagcgcgctcgatgagtccgcgcaggcg
tcgagcggcaccatgctgctgctcgtcttcacgatgctcgcgggcagcggcgtgctcatc
tatctgttcgcgagccacgagcgtcagtcgcgcgaaaagctcggcgtcgtgcgcgcgagg
cagcgcagcaacgaacgctttcgcggcatgttcgaggcgcatcccgtgccgatgtggatc
gtcgatcgcgaaacgatgcgcttcatcgccgtgaatccggccgcgatcgcacgcttcggc
ttcaacgagccggagttcatgaacatgacgctgcgcgatctgcaccacgccgacgacttc
gacagcttcgccgcgcggctcgcgcgcagcggccgcgaaacgggcgacgggccgatgtcg
gcgatctccggacaaggcccggcgggcgtgtggcgctatcgctgcaaggacggctcgatc
gtcagcgccgatgtgtcgcatcacgcgctcgcctattcgaaccggccgggcatcttcatg
ctggccaacgacgtcacggatcgcatcaacgcggaagccgaggcgcgccgctcgaacgag
atgctcgaagcggtcatcgacaatattccgcagcgcgtgttctggaaggaccgcgagttg
cgctatctcggctgcaacaacgcgttcgcgcgcgacgcgggtcttgcgtacaacgagcag
gtcatcggcaagacggattacgaactgccgtggagcgcgctcgcggatgtcgtgcgcgcc
gacgacgaagaagtcatcgtgacgacagtgccgaagatgcatcacgagcgcgatatcgtg
atgggcgacgagttgcgcaccgtggtttccagcaagctgccgctgctcgatggcgaaggc
cagacgatcggcatactcggctcgtatcacgacgtcaccgatcacaagcgcgccgagctc
gcgctgcgcctgcaaagccgcgcgctcgacgcgagcgtgaacgcgatcctgatcacgggc
gtggtcgacggcgcgaacgtgatcgagtacgcgaatccggcgttcaagcgcatcaccggt
tacgacccgagcgaggtcatcggccacgattgccgcttcctgcacggaccggacggcgat
caggatggactcaccgcgattcgccgcgcgctcgccgtcaacacggaggcgagcgtcgtg
gtgcgcaactatcgcaaggacggcgcgctcttctggaatcagcttttcgtcgcgcccgtg
ccgaacgcgcagggcttgaccacgcatcacatcggcatcatcaacgacgtgaccgacctg
atgcgctatcaggaagagctcgaatatcaggccaattacgacacgctcacgcgcctgccg
aaccgcaatctgctgcgcgaccgtctgcagcacgcgatcgagacggcgcggcggcgcgag
acgaagatcgccgtcgtgttcatggatctcgacggcttcaagaacgtgaacgacagcctc
ggccacagcgtcggcgaccggctgctcgcggtgatcgcggatcggctcgcacgctcggcg
cggtcgagcgataccgtggcgcgtcacggcggcgacgagttcgtcgtcgtgttgcccgat
ctcaccgatgaagccggcctgatcgcgtggatggagcgcacgcgcgcggcgatttccgag
ccggtctggctcgacgacaccgagctgtacgtgggctgcagcatgggcgcgagtctcttc
ccgcaagacggcgacgacgccgaaaccgtcatgaagaaggccgatctcgcgatgtaccgc
gcgaaggacatgggccgcaatacgtaccagttctatcagccggagatgaacgcgagcgtc
ggcgcgcgcatgaatctcgaacgccgcctgcgccgcgcgctgcgtgacggcgagttcctg
ctgcactatcagccgcaggtggacatgacgacgcgcgcgatcgtcggcatcgaggcgctc
gtgcgctggctcgatcccgagcagggactggtctcgccggcgtcgttcattccggtggcg
gaggagagcgggctgatcgggccgctgtccgaatgggtgctgcgcgaggcgtgccggcag
aacaaggcgtggcaggatgcgggactgccgccggcgcgcgtttcggtgaatctgtcggcg
cggcattttcagcagcgcaacattgcacggctcgtgacgtccgtgctcgaagaaaccggc
ctcgcgccgcgctatctcgaactcgaactcacagaaagcgcgatcatgcgcaacgccgag
gaagccatcacgatgctttcggagctatcggcgctgggtatcggcattgctatcgacgac
ttcggcacgggctattcgagcctgtcgtatctgaagcgctttccggtgcatcggctgaag
atcgaccgctcgttcgtcgcggatatcggcgcgtcgagcgacgacgaaaccatcacgtcg
gcgatcatcgcgctcgcgcattcgctggaactgcaggtgatcgcggaaggcgtggaaacg
cacgcgcagcacgacttcctgcgcgagcgcgattgcgacgagatgcaaggctatctgttc
tcgcgcccgatgccgcacgaggcgattcccggcctgctacagcaaggcgtgctgccgcac
tga
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