Burkholderia sp. YI23: BYI23_A003340
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Entry
BYI23_A003340 CDS
T01711
Symbol
ruvB
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
byi
Burkholderia sp. YI23
Pathway
byi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
byi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BYI23_A003340 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
byi03400
]
BYI23_A003340 (ruvB)
Enzymes [BR:
byi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BYI23_A003340 (ruvB)
DNA repair and recombination proteins [BR:
byi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BYI23_A003340 (ruvB)
RecFOR pathway proteins
BYI23_A003340 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_16
AAA_22
nSTAND3
AAA_3
Rad17
AAA_14
AAA_18
DUF815
NTPase_1
TsaE
AAA_17
RNA_helicase
NB-ARC
AAA_33
Bac_DnaA
AAA_28
ABC_tran
NACHT
IstB_IS21
Sigma54_activ_2
AAA_24
Zeta_toxin
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AET88172
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All DBs
Position
1:complement(372436..373512)
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AA seq
358 aa
AA seq
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MYNRPMIETDKLAAERVISATPVSPNEEAFERALRPHKLDEYIGQEKARGQLEIFIEAAK
RRSEALDHVLLFGPPGLGKTTLAHIIAREMGVNLRQTSGPVLERAGDLAALLTNLEANDV
LFIDEIHRLSPVVEEILYPALEDYQIDIMIGEGPAARSVKLDLQPFTLVGATTRAGMLTN
PLRDRFGIVSRLEFYNASELARIVARSASLLKADIVNEGALEIAKRSRGTPRIANRLLRR
VRDYAEVKADGMITADVADKALKMLDVDPVGFDLMDRKLLEAILHKFDGGPVGVDNLAAA
IGEERDTIEDVLEPYLIQQGFLQRTPRGRVATMLTYRHFGLAAPDAGPIRDLWDTNKG
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
ctgtacaatcgacccatgatcgaaaccgacaaactcgccgccgaacgcgtcatctcggcc
acgcccgtctcgccgaacgaggaagcgttcgaacgggcgctgcgtccacacaagctcgac
gaatacatcgggcaggaaaaggcgcgcggccagctcgaaatcttcatcgaggcggcgaag
cgccgttccgaagcgctcgatcatgtgttgctgttcgggccgccgggtctcggcaagacg
acgctcgcgcacatcatcgcgcgggaaatgggcgtgaatctgcggcagacgtcggggccg
gtgctggagcgcgcgggcgacctcgccgcgctgctcaccaatctcgaagcgaacgacgtg
ctgttcatcgacgagattcaccggctttcgccggtggtcgaggaaatcctgtacccggca
ctcgaggattatcagatcgacatcatgatcggcgaagggccggccgcgcgcagcgtgaag
ctcgatcttcagccgttcacgctcgtcggcgcgaccacgcgcgcgggcatgctgacgaat
ccgctgcgcgaccgcttcggcatcgtgtcgcggctggagttttataacgcaagtgagttg
gcgcgcatcgtcgcgcggtcggcgtcgctgttgaaggcggatatcgtcaacgagggcgcg
ctggaaatcgcgaagcgttcacgcggcacgccgcgtatcgcgaaccggctgctgcggcgc
gtgcgcgactacgccgaagtgaaggcggacggcatgatcaccgccgacgtcgccgataaa
gcgctgaagatgctcgacgtcgatcccgtcggcttcgacctgatggaccgcaagctgctc
gaagcgattctgcacaagttcgacggcgggccggtcggcgtggacaatctcgccgcggcc
atcggcgaagagcgcgatacgatcgaagacgtgctcgaaccgtatctgatccagcaaggc
tttttgcagcgcacgccgcgcgggcgcgtcgcgaccatgctcacctatcggcacttcggc
ctcgccgcgccggacgcggggcccatccgcgatctctgggataccaacaagggctag
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