Burkholderia sp. YI23: BYI23_A005850
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Entry
BYI23_A005850 CDS
T01711
Symbol
holC
Name
(GenBank) DNA polymerase III chi subunit HolC
KO
K02339
DNA polymerase III subunit chi [EC:
2.7.7.7
]
Organism
byi
Burkholderia sp. YI23
Pathway
byi03030
DNA replication
byi03430
Mismatch repair
byi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
byi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BYI23_A005850 (holC)
03430 Mismatch repair
BYI23_A005850 (holC)
03440 Homologous recombination
BYI23_A005850 (holC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
byi03032
]
BYI23_A005850 (holC)
03400 DNA repair and recombination proteins [BR:
byi03400
]
BYI23_A005850 (holC)
Enzymes [BR:
byi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BYI23_A005850 (holC)
DNA replication proteins [BR:
byi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BYI23_A005850 (holC)
DNA repair and recombination proteins [BR:
byi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BYI23_A005850 (holC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_chi
Motif
Other DBs
NCBI-ProteinID:
AET88423
LinkDB
All DBs
Position
1:664294..664710
Genome browser
AA seq
138 aa
AA seq
DB search
MTRIDFHTNVGDPLAYACRLARKAYLSGKPLVVLAEPQRLAAFDEQLWTFQPLEFVPHCM
AKSPLAEDTPVVLTSNLDEAPHHHVLVNLGAPVSAQFARFERLVEIVGSDGDDLAAGRER
YRFYRDRGYAIETHNQGG
NT seq
417 nt
NT seq
+upstream
nt +downstream
nt
atgacccgtatcgactttcacactaacgtaggcgatccgctcgcgtacgcctgccgcctc
gcgcgcaaggcgtatctgagtggcaagccgctcgtcgtgctcgccgaaccgcagcgcctc
gccgcgttcgacgagcagttgtggaccttccagccgctcgaattcgtgccgcactgcatg
gcgaagagcccgctcgcggaggatacgccggtggtgctcacgtcgaatctcgacgaagcg
ccgcatcatcacgtgctcgtgaatctcggtgcgccggtgtccgcgcagttcgcgcgcttc
gagcgtctggttgagatcgtcggcagcgatggcgacgatctcgccgcgggccgcgagcgc
tatcgcttctatcgcgatcgcggctacgccatcgaaacgcacaatcagggcggttga
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