Burkholderia sp. YI23: BYI23_A008540
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Entry
BYI23_A008540 CDS
T01711
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
byi
Burkholderia sp. YI23
Pathway
byi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
byi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BYI23_A008540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
byi03400
]
BYI23_A008540
Enzymes [BR:
byi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BYI23_A008540
DNA repair and recombination proteins [BR:
byi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BYI23_A008540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AET88692
LinkDB
All DBs
Position
1:959956..963372
Genome browser
AA seq
1138 aa
AA seq
DB search
MLELFYSNRHETLAAALFEDLDAFAMREGDPFAREAVIVPSAALRRRLELDMAGRFGICA
NVDFCYLAQWLWAQIGRVLPVPAHSPFAPDRLAWRCYRLFEDPSFGDSARLSTYLHAADD
SMRYELVRRIATVFDHYLTYRPEWLGQWQAGGSILAGASGSGAESDTRGPRLAGANEIQR
EDERWQAALWRALLADLAVDANGHEKDPTPPAYRFLADAPNLDLDAAMRAQWPRRISVFA
LPTMPPLHIALLRELSRWIDVRVYASNPCREFWFDIVSEARVEQLELKGEADYQEVGHPL
LAEWGRQTQAQLHMLHELTERAASSERQHFEGNPAPTWLARVQNGILALDEENAGPQPEA
ITANGIEVHVCHSLSRQLEVLHDRLLDWFDDIEGLEPSDVLVAFPDLAVAGPLIDGIFGT
APAGASNERRRIPYRITGLPPSQANPVARALIDWLALTERSVGAPELVEWLRVDAIAARY
GIDASALETAQAWLAAAGARRGLRPDEVTAADVPAARHTFADALTRLYLGYALPEGGAPV
AEWLPIEGANGSDAELLGRLTRFVDDIDAFAERIASPRTARAWGDLLLDALERFFDAGVA
FTDVLSDVRGAIDALVVAMDEGAGATEVSAAVIRTALTDTLDDPARGGVPWGGVTFSSLT
SLRGLPYRVVCLLGMDDGMLPSLTRADEFDLMARFSRLGDRQRRDDERNLFLDLMLAARD
RFMIAYTGRSIRDNAVLPPAALIDELLDYLAKSVAGKHAAPEALEAARASFVFEHPLQPY
APDYFNEEGRLFTYEPERAELARALESGKTQPVAPFFSAPLPREDDVQTVAFDDFVRFWR
HPARALLRDRLGIALFDAEAELDDTEPFELGFSGRDALAARVLPALLETADDNDRTARER
ARRVARASPEMPGGATGGVWQARELHALGHLAERVRASTAAGIERLPFSLDLTPRWPHPH
DQDDVALFGAHDDALVDLRPMTLVGTLNALTPQGQVIYRYDAPRARDYLSAWLAHLAYCA
ALPDGPRRTVWHGRGSQAADFELAPVADPLAHLAALAALYRAGRRMPLRFFPKSAWLKVK
EGDAKAQGAWESERTRAESDDPVLRIAFRGANLALDDAFAAIARIVFEPLVQHLRSGA
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaactcttctattcgaaccgtcacgagacgctcgccgccgcgctcttcgaagac
ctcgacgccttcgcgatgcgcgagggcgatcccttcgcgcgcgaggccgtgatcgtgccg
agcgcggccctgcggcggcggctcgaactcgacatggccgggcgcttcggcatctgcgcg
aacgtcgatttctgctatctggcgcagtggctgtgggcgcagatcgggcgcgtgctgccg
gtgcccgcgcattcgccgttcgcgccggaccggctcgcgtggcgctgctaccggctcttc
gaagacccgtcgttcggcgattcggcgcggctctcgacctacctccacgccgccgacgat
tcgatgcgctacgagctcgtgcgccgcatcgcaacggtctttgaccactatctgacctat
cggccggagtggctggggcaatggcaggcgggcgggtcgatcctggcgggcgcttccggc
tcaggcgccgaaagcgatacgcgcggtccgcgcctcgcgggcgcgaacgagatccagcgc
gaggacgaacgctggcaggccgcgctctggcgcgcgctgctcgcggatctcgcggtcgat
gcgaacggccacgaaaaagacccgacgccgcccgcgtaccgctttctcgccgatgcgccc
aacctcgatctcgatgccgcgatgcgcgcgcaatggccgcgccgcatcagcgtgttcgcg
ctgccgaccatgccgccgctgcatatcgcgcttttgcgcgagctgtcgcgctggatcgac
gtgcgcgtctacgcaagcaatccgtgccgcgagttctggttcgatatcgtgagcgaggcg
cgcgtcgagcaactcgaattgaaaggcgaggcggattaccaggaagtcggtcatccgctg
ctcgcggaatggggccggcagacgcaggctcagcttcacatgctgcacgaactgaccgag
cgcgcggcgtccagcgaacggcagcatttcgaaggcaatcccgccccgacctggctcgcg
cgggtgcagaacggcattctcgcgctcgatgaagagaacgccgggccgcagcccgaggcg
atcaccgcgaacggcatcgaagtgcatgtgtgccacagcctgtcgcgccagctcgaagtg
ctgcacgaccggctgctcgactggttcgacgatatcgaagggctggagccgtcggacgtg
ctcgtcgcgtttccggacctcgccgtggcggggccgctcatcgacggcattttcggcacc
gcgcccgcgggcgcgagcaacgaacggcggcgcattccgtatcgcatcacgggcctgccg
ccgtcgcaggcgaatccggtggcgcgcgcgcttatcgactggctcgcgctcaccgaacgc
agcgtcggcgcgccggagctcgtcgaatggctgcgcgtggacgccatcgcggcgcgctac
ggcatcgacgccagcgcgctcgaaacggcgcaggcgtggctcgcggcagcgggcgcgcgg
cgcggcctgcgcccggacgaagtcacggccgcggacgtgcccgccgcccgccacacgttc
gccgatgcgctcacgcgtctctatctcggctacgcgttgccggagggcggcgcgccggtc
gcggagtggctgccgatcgaaggcgcgaacggctcggacgccgagttgctcggccgcctc
acgcgcttcgtcgacgacatcgacgccttcgccgagcgcatcgcgagcccgcgcaccgcg
cgcgcctggggcgatctgctgctcgatgcgctcgaacgctttttcgatgccggcgtggcc
tttaccgacgtgctgtccgacgtgcgcggcgcgatcgatgcgctcgtcgtggcgatggac
gaaggcgcgggcgcaacggaagtgtcggcggcggtgatccgcaccgcgctcaccgatacg
ctcgacgatcccgcgcgcggcggcgtgccgtggggcggcgtcacgttttcgtcgctgacg
agcctgcgcggcctgccgtaccgcgtggtctgcctgctcggcatggacgacggcatgctg
ccgagcctcacgcgcgccgacgagttcgacctgatggcgcgcttttcccggctcggcgac
cggcagcgccgcgacgacgagcgcaatctgttcctcgatctcatgctggccgcgcgcgac
cggttcatgatcgcctacacgggccgcagcattcgcgacaacgccgtgctgccgcccgct
gcgcttatcgacgaactgctcgactatctggcgaagtcggtggcgggcaagcacgcggcg
cccgaggcgctcgaagcggcgcgcgcgagcttcgtattcgagcatccgctgcagccttac
gcgcccgattatttcaacgaggaaggccggctcttcacctacgagcccgagcgcgccgaa
ctcgcgcgcgcgctggagtccggcaaaacgcagccggtcgcgccgtttttctccgcgccc
ctgccgcgcgaagacgacgtgcagacggtcgctttcgacgacttcgtgcgcttctggcgg
catcctgcgcgcgcgcttttgcgcgacaggctcggcatcgcgctcttcgatgccgaagcc
gagctcgacgacaccgagccgttcgaactgggcttctcaggccgcgatgcgctcgccgcg
cgcgtgctgcccgcgttgctcgaaaccgccgacgacaacgatcgcaccgcccgcgaacgc
gcgcgccgtgtcgcgcgggcaagccccgaaatgcccggcggcgcgacgggcggcgtgtgg
caggcgcgcgaactgcacgcgctcggacatctcgcggagcgcgtgcgcgcgtcgacggcg
gcgggcatcgaacgtctgccgttctcgctcgatctcacgccgcgctggccccatccacac
gatcaggatgacgtcgcgctcttcggcgcgcacgacgatgcactcgtcgatctccgtccg
atgacgctcgtcggcacgctcaacgcgctgacgccgcaaggtcaggtgatctatcgctac
gacgcgccgcgcgcgcgcgactatctttcggcgtggctcgcgcatctcgcgtattgcgcg
gcgctgcccgacggcccgcgccgcacggtgtggcatggccgcggctcgcaggcggcggat
ttcgagctcgcgcccgtcgccgatccgctcgcgcatctcgccgcgctcgccgcgctgtat
cgcgcgggacggcgcatgccgctccggttctttccgaaaagcgcgtggctcaaggtgaaa
gagggcgatgcgaaagcgcagggcgcgtgggagtcggagcgcacgcgcgccgagtccgac
gatcccgttttgcgcatcgcgtttcgcggcgcgaatctcgcactggacgacgccttcgcg
gccatcgcgcgcatcgtgttcgaaccgctcgtgcaacatctgcggagcggcgcatga
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