Burkholderia sp. YI23: BYI23_A016330
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Entry
BYI23_A016330 CDS
T01711
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
byi
Burkholderia sp. YI23
Brite
KEGG Orthology (KO) [BR:
byi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
byi03009
]
BYI23_A016330
Enzymes [BR:
byi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
BYI23_A016330
Ribosome biogenesis [BR:
byi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BYI23_A016330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AET89471
LinkDB
All DBs
Position
1:complement(1843786..1845627)
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AA seq
613 aa
AA seq
DB search
MHAADAPESADAGERTRTDRTEEGGEGDDRPRRGLRRGPRSLIARRRAVAKTKGGEGEPA
APGAVNETPPDGVVAAQVRTPRKDPNARPRKSEGANPRGRKNARPDAAEAGAGAPDEAVA
QVAAPAPREGGQRKGAQQKRGKRNDAGPATVESAAHAAVDDVFAYVTSPAFDADNGSGGV
RAPMLRRGRNAPQQKRVLEPDEDAPKLHKVLADAGMGSRRDMEELIIAGRVSVNGEPAHI
GQRIMPTDQVRINGKPLKRKLASKPPRILLYHKPTGEIVSHADPEGRPSVFDKLPSMKTA
KWLAVGRLDFNTEGLLLLTTSGDLANRFMHPRYSVEREYAVRVVGQLSEAMKQKLLKGVE
LDDGPANFLRIQDGGGEGTNHWYHVALAEGRNREVRRMFEAAGLMVSRLIRTRHGPIALP
RGLKRGRWEELEDNQVRSLLESVGLKVPTAEKGGRSAAPRVQPDPMQTSMGFITREPVLS
SHSRMTQQTPGRGGRRGQPGGGMPGSFGLGGMGGFGGGNAGPGNAGGTGRRGGREPNGNR
IGNEPNGNRANGARPAPRGARPQGAPQGMGGGAGKRTAGGNAQRGNRQGGAQQGTGQGKA
GAGRGARNRSRGR
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
gtgcacgccgcggacgcccctgagtcggccgacgccggcgaacgcacgcgcaccgatcgc
accgaggaaggcggcgagggcgatgaccgtccgcgtcgcggactgcgccgcggaccgcgc
agcctgatcgcgcggcgacgcgctgtcgcaaagacgaagggcggcgaaggcgaacccgcg
gctccgggcgcggtgaacgagacgccgcccgatggcgtcgtcgccgcgcaggtgcgcacg
ccgcgcaaggacccgaacgcacggccgcgcaagagcgaaggcgcgaatccgcgtggccgc
aagaacgcgcgccccgacgccgctgaggccggcgccggtgctcccgacgaagccgtggcg
caggtcgccgcgcccgcgccccgcgaaggcggacaacgcaagggcgcgcagcaaaagcgc
ggcaagcgcaacgacgcgggccccgcgacggtcgagagcgccgcgcacgccgccgtcgac
gatgtcttcgcctatgtgacctcgcccgccttcgacgccgacaacggctcgggcggcgtg
cgcgcgccgatgctgcgccgtggccgcaatgcgccccagcaaaagcgcgtgctggaaccg
gacgaggacgcgccgaagctgcacaaggtgctcgccgacgcgggcatgggctcgcgccgc
gacatggaagaactgatcatcgccgggcgggtgtcggtgaatggcgagccggcgcacatc
ggccagcgcatcatgccgacggaccaggtgcgcatcaacggcaagccgctcaagcgcaag
ctcgcgagcaagccgccgcgcattctgctgtatcacaagccgacgggcgagatcgtcagc
cacgcggacccggaaggccgtccgtccgtgttcgacaagctgccgtcgatgaaaacggcc
aagtggctcgcggtcgggcgtctcgacttcaacaccgagggcctactgctgctcacgacg
tcgggcgatctggcgaaccgcttcatgcatccgcgctacagcgtcgagcgtgaatacgcg
gtgcgcgtggtcggccagctgtcggaagcgatgaagcagaagctgctgaaaggcgtcgaa
ctcgacgacggtcccgcaaacttcctgcgtattcaggacggcggcggcgagggcacgaat
cactggtatcacgtcgcgctggcggaaggccgcaatcgcgaagtgcgccgcatgttcgaa
gcggcgggactcatggtgagccggctgatccgcacgcgtcacggtccgatcgccctgccg
cgcggactcaagcgcggccgctgggaagagctcgaagacaatcaggtgcgcagcctgctg
gaatcggtcgggctgaaagtgcccacggccgagaagggcggacgcagcgccgcgccgcgc
gtgcaacccgatccgatgcagacgtcgatgggcttcatcacgcgcgagccggtgctgagt
tcgcattcgcgcatgacgcagcagacgccgggacgcggcggccggcgcggtcaaccgggc
ggcggcatgccgggcagcttcggactgggcggcatgggaggttttggcggcggcaatgcg
ggtcccggcaatgccggcggcacgggccgtcgcggcggacgcgaaccgaacggcaaccgc
atcggcaacgaaccgaacggcaatcgtgcgaatggcgcccgtccggccccgcgcggcgcc
cgcccgcaaggcgcgccgcagggcatgggcggcggcgcgggcaagcgcacggccggcggc
aacgcgcagcgcggcaatcgtcagggcggcgcgcagcaaggcacggggcagggcaaggcc
ggcgccgggcgcggcgcgcgtaatcgctcgcgcggtcgttga
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