Burkholderia sp. YI23: BYI23_A021020
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Entry
BYI23_A021020 CDS
T01711
Symbol
groEL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
byi
Burkholderia sp. YI23
Pathway
byi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
byi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BYI23_A021020 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
byi03019
]
BYI23_A021020 (groEL)
03110 Chaperones and folding catalysts [BR:
byi03110
]
BYI23_A021020 (groEL)
03029 Mitochondrial biogenesis [BR:
byi03029
]
BYI23_A021020 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
byi04147
]
BYI23_A021020 (groEL)
Enzymes [BR:
byi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
BYI23_A021020 (groEL)
Messenger RNA biogenesis [BR:
byi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
BYI23_A021020 (groEL)
Chaperones and folding catalysts [BR:
byi03110
]
Heat shock proteins
HSP60 / Chaperonin
BYI23_A021020 (groEL)
Mitochondrial biogenesis [BR:
byi03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
BYI23_A021020 (groEL)
Exosome [BR:
byi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
BYI23_A021020 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
BYI23_A021020 (groEL)
Exosomal proteins of breast cancer cells
BYI23_A021020 (groEL)
Exosomal proteins of colorectal cancer cells
BYI23_A021020 (groEL)
Exosomal proteins of bladder cancer cells
BYI23_A021020 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Phage_GP20
DUF5881
Motif
Other DBs
NCBI-ProteinID:
AET89940
LinkDB
All DBs
Position
1:complement(2375908..2377548)
Genome browser
AA seq
546 aa
AA seq
DB search
MAAKEVTFGDSARAKMVEGVNILANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEI
ELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQSIVREGMKYVASGMNPMDLKRGI
DKAVAAAIEELRKISKPCTTNKEIAQVGAISANSDTSIGDRIAEAMDKVGKEGVITVEDG
KSLQDELDVVEGMQFDRGYLSPYFINNPDKQVAVLENPFVLLHDKKVSNIRDLLPVLEQV
AKAGRPLLIIAEDVEGEALATLVVNNIRGILKTVAVKAPGFGDRRKAMLEDIAILTGGQV
VAEETGLTLEKATLAELGQAKRIEVGKENTTIIDGAGEAVNIEARVKQVRTQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVAGGGVALI
RARKAIEGVKGANADQDAGIKIVLRAMEEPLRQIVTNGGEEASVVVAAVAQGSGNYGYNA
ATGEYGDLVEAGVVDPTKVTRTALQNAASVAGLLLTTDAAVAELPKEDAPMPGGMPGGMG
GMGMDM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagaagtcacttttggcgattccgcacgcgccaagatggtcgaaggcgtg
aacatcctggccaacgcggtcaaggtcacgctgggtccgaagggccgcaacgtcgtgctc
gagcgctctttcggcggcccgacggtcacgaaggacggtgtttcggtcgcgaaggaaatc
gaactgaaggacaagctccagaacatgggcgcgcagatggtcaaggaagtcgcttccaag
accagcgacaacgcaggtgacggcaccacgaccgctaccgtgctcgcgcaatcgatcgtc
cgcgaaggcatgaagtacgtcgcatcgggcatgaacccgatggacctgaagcgcggcatc
gacaaggctgttgcagccgcaatcgaagaactgcgcaagatcagcaagccctgcacgacc
aacaaggaaatcgcacaagttggcgcgatctcggcgaacagcgacacgtcgatcggcgat
cgcatcgctgaagcgatggacaaggtcggcaaggaaggcgtcatcaccgtcgaagacggc
aagtcgctgcaagacgaactcgacgtcgtggaaggcatgcagttcgaccgcggctacctg
tcgccgtacttcatcaacaacccggacaagcaagtcgccgtcctcgaaaacccgttcgtg
ctgctgcacgacaagaaggtttcgaacatccgcgatctgctgccggtgctggaacaagtt
gcaaaggctggccgtccgctgctgatcatcgctgaagacgtcgaaggcgaagcactggct
acgctggtcgtcaacaacatccgcggcatcctgaagaccgttgccgtgaaggctccgggc
ttcggcgaccgtcgcaaggccatgctggaagacatcgcgatcctgaccggcggtcaagtg
gttgcggaagaaaccggcctcacgctcgaaaaggcaacgctggctgaactgggccaggcg
aagcgtatcgaagtgggcaaggagaacacgacgatcatcgacggcgctggcgaagccgtg
aacatcgaagcgcgcgtgaagcaagtgcgcacgcagatcgaagaagcaacgtcggattac
gaccgtgaaaagctgcaagagcgcgtggccaagctggccggcggcgttgcggtgatcaag
gtcggcgctgcgaccgaagtcgaaatgaaggaaaagaaggcacgtgtcgaagacgcactg
cacgcaacgcgcgcagcggtggaagaaggcatcgtggctggcggcggcgttgcgctgatc
cgcgctcgcaaggcgatcgaaggcgtgaagggcgcgaatgcggaccaggacgcaggtatc
aagatcgtgctgcgcgcaatggaagagccgctgcgtcagatcgtcacgaacggcggcgaa
gaagcttcggtggtcgtggcggcggttgctcaaggttcgggcaactacggctacaacgcg
gcgaccggcgagtacggcgacctggttgaagccggcgtcgtcgacccgacgaaggtgacg
cgcaccgcgctgcaaaacgcggcatcggtggcaggcctgctgctgacgaccgacgcagcc
gttgccgaactgccgaaggaagacgctccgatgcctggcggcatgcccggcggcatgggc
ggtatgggcatggacatgtaa
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