Burkholderia sp. YI23: BYI23_A024100
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Entry
BYI23_A024100 CDS
T01711
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
byi
Burkholderia sp. YI23
Pathway
byi00300
Lysine biosynthesis
byi00470
D-Amino acid metabolism
byi01100
Metabolic pathways
byi01110
Biosynthesis of secondary metabolites
byi01120
Microbial metabolism in diverse environments
byi01230
Biosynthesis of amino acids
Module
byi_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
byi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BYI23_A024100
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BYI23_A024100
Enzymes [BR:
byi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
BYI23_A024100
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AET90248
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Position
1:2714919..2716181
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AA seq
420 aa
AA seq
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MSDSAFHYVDGVLHAEGVSAASLAEQFGTPLYVYSRDALTRAYHAYADACAGRKATVHVA
VKANSNLAVLNVFARMGAGFDIVSSGELARVLAAGGKAENTVFSGVGKTAAEMREALEAG
VKCFNVESIPELHALNEVATSLGKKAPVSLRVNPDVDAKTHPYISTGLKSNKFGVAFGDA
RATYREAHAMPNLDVVGIDCHIGSQITEISPYLDAVDKLLELVEQIEADGMRIRHVDVGG
GLGITYDDETPPDIGVFVKTLLDHIEQRGHGEREVYFEPGRSLVGNAGVLLTRVEFLKPG
EEKNFAIVDAAMNDLARPAMYEAFHRIVPVEKRNATAHKYDVVGPVCESGDWLGRDRELA
IEPGDLLAICSAGAYGFVMSSNYNTRPRAAEIMVDGERARLVRERETVAQLFAGESILPD
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgagtgattccgcattccactacgtcgatggcgtgctgcacgccgagggcgtctccgcc
gcgtcgctcgcggagcagttcggcacaccgctttacgtctattcgcgcgatgcgctcacg
cgcgcgtatcacgcctacgccgacgcctgcgcgggccgcaaggcgaccgtgcatgtcgcg
gtgaaggcgaacagcaatctcgccgtgctcaacgtgttcgcgcgcatgggcgcgggcttc
gacatcgtgtcgtcgggcgagcttgcgcgcgtgctcgcggcgggcggcaaagcggaaaac
accgtgttttccggcgtcggcaagacggcggccgaaatgcgcgaggcgctcgaagcgggc
gtgaagtgcttcaacgtcgaatcgattcccgagttgcacgcgctgaacgaagttgcgacg
tcgctgggcaagaaggcgcccgtttcgctgcgcgtgaatccggacgtcgatgcgaaaacg
catccgtatatttccacgggcctgaagtcgaacaagttcggcgtcgcgttcggcgacgcg
cgcgccacgtaccgcgaagcgcatgcgatgcccaatctcgatgtcgtcggcatcgattgc
catatcggctcgcagatcacggaaatcagcccctatctcgatgccgtcgacaagctgctc
gaactcgtcgagcagatcgaagccgatggcatgcgcattcgtcacgtcgatgtcggcggc
ggtctcggcattacctacgacgacgaaacgccgcccgatatcggcgtgttcgtgaagacg
ctgctcgatcacatcgagcagcgcggccacggcgagcgggaagtgtatttcgagccgggg
cgctcgctcgtcggcaatgcgggcgtgctgcttacgcgcgtcgagtttctgaagccgggc
gaggaaaagaacttcgccatcgtcgatgccgcgatgaacgacctcgcgcgccccgccatg
tacgaggcgtttcatcgcatcgtgcccgtcgagaagcgcaatgccaccgcgcataaatac
gatgtggtcggtccggtatgcgaaagcggcgactggctcgggcgcgatcgcgaactggca
atcgagccgggcgatctgctcgcgatctgctcggcgggcgcgtacggcttcgtgatgagc
tcgaactacaacacgcgtccgcgcgccgccgaaatcatggtcgatggcgagcgcgcgcgt
ctcgtgcgcgagcgcgaaacggttgcgcagttgttcgccggggaatcgattctgccggac
tga
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