Burkholderia sp. YI23: BYI23_A024210
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Entry
BYI23_A024210 CDS
T01711
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
byi
Burkholderia sp. YI23
Pathway
byi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
byi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BYI23_A024210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
byi03021
]
BYI23_A024210
03400 DNA repair and recombination proteins [BR:
byi03400
]
BYI23_A024210
Enzymes [BR:
byi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BYI23_A024210
Transcription machinery [BR:
byi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BYI23_A024210
DNA repair and recombination proteins [BR:
byi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BYI23_A024210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
AET90259
LinkDB
All DBs
Position
1:complement(2727447..2728424)
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AA seq
325 aa
AA seq
DB search
MQTSLLKPKIIAVESLGENHAKVVMEPFERGYGHTLGNALRRVLLSSMIGYAPTEVTIAG
VVHEYSTLDGVQEDVVNLLLNLKGVVFKLHNRDEVTVTLRKEGEGLVTAGDIELAHDCEV
INPEHVVAHLSKGGKLDVQIKIEKGRGYVPGNVRRYGEESAKIIGRIVLDASFSPVRRVS
YAVESARVEQRTDLDKLVMNIETNGVISPEEAIRQSARILVDQLSVFAALEGTEAAAEAP
SRAPQIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNEI
KEVLASRGLTLGMKLENWPPAGLDK
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccagtttgttgaagcccaagatcatcgcagttgaatcgcttggtgagaaccac
gcgaaagtggttatggagccgttcgaacgcggctatggccacaccttgggtaacgcgctt
cggcgcgtgctgttgtcgtcgatgatcggctacgcgccgaccgaagtgacgatcgcaggc
gtcgtgcacgaatactcgacgctcgacggtgtgcaagaggatgtggtcaacctgctgttg
aacctgaagggcgtcgtcttcaagctgcacaaccgcgacgaagtcactgtgacgctgcgc
aaggaaggcgaaggccttgtcacggccggcgatatcgaactcgcgcacgactgcgaggtc
atcaatccggaacacgtggtcgcgcacctgtcgaagggcggcaagctcgacgttcagatc
aagatcgaaaaaggccgcggctatgtgccgggcaacgtgcgtcgttacggtgaagagtcg
gccaagatcatcggccgtatcgtgctggatgcgtcgttctcgccggttcgccgcgtgagc
tacgccgtggaaagcgcgcgtgtcgaacagcgtaccgacctcgacaagctcgtgatgaac
atcgagaccaacggcgtcatttcgccggaagaggcgatccgccagtcggctcgcattctg
gttgaccagttgtcggtgttcgcagcgttggaaggcacggaagcggcagcggaagcgccg
tcgcgtgcaccgcagatcgatccgatcctgctgcgcccggtggacgatctcgaactcacg
gttcgttccgcgaactgcctgaaggccgagaacatctactacatcggcgatctgatccag
cgcacggaaaacgaactgctgaagacgccgaacctgggccgcaagtcgctgaacgaaatc
aaggaagtgctggcttcgcgcggtctgacgctcggtatgaagctcgaaaactggccgccg
gctggtctcgacaagtaa
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