Burkholderia sp. YI23: BYI23_A024530
Help
Entry
BYI23_A024530 CDS
T01711
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase, RecQ family
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
byi
Burkholderia sp. YI23
Pathway
byi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
byi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BYI23_A024530 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
byi03019
]
BYI23_A024530 (recQ)
03400 DNA repair and recombination proteins [BR:
byi03400
]
BYI23_A024530 (recQ)
Enzymes [BR:
byi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BYI23_A024530 (recQ)
Messenger RNA biogenesis [BR:
byi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BYI23_A024530 (recQ)
DNA repair and recombination proteins [BR:
byi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BYI23_A024530 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AET90291
LinkDB
All DBs
Position
1:complement(2746430..2748277)
Genome browser
AA seq
615 aa
AA seq
DB search
MSRSLEILNEIFGYPAFRGQQAEIVEHVAGGGDSLVLMPTGGGKSLCYQIPSLVRREAGL
GAGIVVSPLIALMQDQVAALTEVGVRAAYLNSTLSGAEAAATERALRNGEIDLLYVAPER
LMTPRFLDLLDSSPVGLFAIDEAHCVSQWGHDFRPEYIQLSVLHERFPNVPRIALTATAD
AITRDEIVHRLALDDARIFVSSFDRPNIRYRIVEKDNARSQLLDFIRAEHTNKDGTTDAG
VVYCLSRRKVEETADWLKGQGVRALPYHAGMEFETRQKHQEMFQREEGIVMCATIAFGMG
IDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGLPANAWMAYGLGDVVQQRKMIDESEADD
AHKRVQTGKLDALLGLCEVASCRRVRLLAYFGETSTPCGNCDTCLEPPASFDATREAQMA
LSCVYRAQRASGFHFGAGHLIDILRGTRSEKVLQRGHEKISTFGVGAALSEPEWRAVFRQ
LVAFGFLAVDHEGFGSLVLTDASKPVLKGEERVTLRKYVKPTRARSSSSRTGERADPTAG
MSTREKSRWERLRAWRAETAKSDGVPAYVIFHDATLAEIARSDPDTIDDLRHIPGIGVRK
LERFGDELLDVVGSD
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggtcgctcgaaatactcaacgaaatcttcggctatcccgcgtttcgcggacaa
caggcggagatcgtcgagcacgtcgcgggcggcggcgattcgctcgttctcatgccaacg
ggcggcggcaagtcgctgtgctatcagataccgtcgctcgtgcggcgcgaggcggggctt
ggcgcgggaatcgtcgtgtcgccgctgatcgcactgatgcaggatcaggtcgccgcactg
acggaagtcggcgtgcgcgccgcgtacctcaattcgacgctctccggcgccgaagccgcc
gcgaccgaacgcgcgttgcgcaatggcgaaatcgatctgctgtacgtcgcgcccgagcgg
ctgatgacgccgcgcttcctggatttactcgacagctcgccggtcgggctcttcgcgatc
gacgaagcgcattgcgtgtcccaatggggtcacgattttcgccccgaatacattcagctt
tcggtgctgcacgagcgctttccgaacgtgccgcgcatcgcgctcacggcgaccgcggat
gcaatcacgcgcgatgaaatcgtgcatcgcttggcgctcgacgacgcgcgcatcttcgtt
tcgagcttcgaccggccgaatatccgctatcgaatcgtcgagaaggacaacgcgcgctcg
cagttgctcgatttcatccgcgcggaacacacgaacaaggacggcacgaccgatgcgggc
gtcgtctattgcctgtcgcgccgcaaggtcgaggagaccgcggactggctcaaggggcag
ggcgtccgcgcgctgccttatcacgcgggcatggaattcgagacgcgccagaagcaccag
gaaatgttccagcgcgaggaaggcatcgtcatgtgcgcgacgatcgccttcggcatgggc
atcgacaagccggatgtgcgcttcgtcgcgcatctggatttgccgaagagcgtcgagggc
tactatcaggaaaccgggcgcgcaggccgtgacggtctgccggcgaacgcgtggatggcc
tatgggctgggcgacgtcgttcagcagcgcaagatgatcgacgagtccgaagcggacgac
gcgcacaagcgcgtgcagaccggcaagctcgatgcgttgctcggcctgtgtgaagtcgcg
tcatgccgccgcgtgcgcctgctcgcgtacttcggcgagaccagcacgccgtgcggcaat
tgcgatacgtgtctggagccgcccgcttccttcgatgccacgcgcgaggcgcagatggcg
ctgtcgtgcgtctatcgggcgcaaagggcgagcggattccattttggcgcgggtcatctc
atcgatattcttcgcggcacgcgcagcgaaaaagtgctgcaacgcggccacgaaaagatt
tctaccttcggtgtaggggcggcgctgtccgaacctgaatggcgtgcggtgtttcggcaa
ctcgtcgcgttcggctttctcgcggtcgatcacgagggcttcggctcgctcgtactgacc
gacgccagcaagccggtgctcaaaggcgaagagcgcgtgacgctgcgcaagtacgtgaag
ccaacgcgggcccggtcgtcttcgagtcgcacgggcgaacgcgccgatccgaccgcgggc
atgtcgacgcgcgaaaagtcccgctgggagcggcttcgcgcgtggcgtgccgaaactgcg
aaaagcgacggcgtgccggcgtatgtcatcttccacgatgccaccctcgcggaaatcgcg
cgtagcgatcccgataccatcgacgatttgcgccatatccccggtatcggcgtgcgcaag
cttgaacgcttcggcgatgaattgctcgatgtcgtcggatcggattga
DBGET
integrated database retrieval system
