Burkholderia sp. YI23: BYI23_B002350
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Entry
BYI23_B002350 CDS
T01711
Name
(GenBank) small conductance mechanosensitive channel ion channel
KO
K22044
moderate conductance mechanosensitive channel
Organism
byi
Burkholderia sp. YI23
Brite
KEGG Orthology (KO) [BR:
byi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
byi02000
]
BYI23_B002350
Transporters [BR:
byi02000
]
Other transporters
Pores ion channels [TC:
1
]
BYI23_B002350
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GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_1st
MS_channel_3rd
DUF2171
Motif
Other DBs
NCBI-ProteinID:
AET90842
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Position
2:297984..300161
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AA seq
725 aa
AA seq
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MSNWAASSPQAASAPTPASQAEMVRALNTLIGTLDNDAQRSAFVAQLKMLRDATQKTAPP
APAPVGGDLLGAIASGIASVETNLSAGITPLRFWSARSSAAANELRAIGADANGESIGEI
VARMSATLAVWGLCAFVLIRLQRRFFMRDGGKGALSPNPTWIELLTFALRQTGPWVVAFF
AVLLLARNMPEALGRTLGLVIAYAIVAGSIFSAICMIVFSIFSTAHRRVAVQQLLARTFW
PLFAIGACGALGDATANADVTRQLGPNLAGVISTFATLTAALLSGYFALAYRRPVTHLIR
NRPYARRRDHQFATEALDILASLWHIPMLLIAAASVVAILDGRGAEGDVLRPSLLSAVLL
VLTLFVSALLLHLTRRRDTRAQRRAPHLTRLLRFGCTLVVLMIWLAYLRFELELWSGPIA
RLIKHSAMTPGFRHALIAVVATVFGAWFIWILIDSIILEALGPNSSRNKALSPGVRARTM
LPLVRNAIFVTVATLAAIVACATLGINLTPLLAGAGVIGLAVGFGAKSLVTDLITGLFII
VEETISVGDWIDIDGGHAGTVMDLTIRTVRLRDGQGAVHTIPFSQIKIVKNLSRDFANAV
FEIRVPFSAKMDDINRMIVEVGAELMQDYRFRQDILGPVEIFGLDRFEANCIVVKGQIKT
RPLQQWSVARAFNARLKLKMDEAGLEMLLPQMQIHAAPGERGPAEGRHAAETPAQPELRV
LKESP
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atctcgaactgggccgcctcgtcgccgcaggccgcgtccgcgccgacgcccgcgagtcag
gccgaaatggtgcgcgcgctgaacacgctcatcggcacgctcgacaacgatgcgcaacgc
agcgcgttcgtcgcgcaactgaagatgctgcgcgacgcgacgcagaaaaccgcgccgccc
gcgcccgcgcccgttggcggtgatctgctcggcgcgatcgcatccggcattgcatcggtc
gaaacgaatctcagcgcaggcattacgccgttgcgcttctggagcgcgcggtcgagcgcc
gcggcgaacgagctgcgcgcgatcggcgccgatgccaatggcgaatcgatcggcgagatc
gttgcgcggatgagcgcgacgctcgcggtctgggggctgtgcgcgttcgtgctgatccgc
ctgcagcggcgcttcttcatgcgcgatggcggcaagggcgcgctctcgccgaatccgaca
tggatcgaattgctgaccttcgccttgcggcagaccggcccgtgggtcgtcgcgttcttc
gcggtgctgcttctcgcgcgcaacatgccggaggcgcttgggcgcacgctcgggctcgtc
atcgcttatgcgatcgtcgcaggttcgatcttttccgcgatctgcatgatcgtgttctcg
atcttcagcaccgcgcatcgccgcgtcgccgtgcagcaactgctcgcgcgcacgttctgg
ccgctcttcgcgatcggcgcatgcggcgcgctcggcgatgcgaccgccaacgccgatgtc
acgcgtcagctcggcccgaatctcgcgggcgtcatatcgaccttcgcgacgctgaccgcg
gcgctgttgagcggttatttcgcgctcgcttaccggcggcccgtcacgcatctgatccgc
aaccggccgtatgcgcgcaggcgagatcatcagttcgcgaccgaagcgctcgatattctc
gcttcgctgtggcatatcccgatgctgctgatcgcggcggcctcggtggtggcgatcctc
gacggacgcggcgcggaaggcgacgtgctgcggccttcgctgctgagcgcggtgctgctg
gtgctgacgctgttcgtctcggcgctgctgctgcatctgacgcgccggcgcgacacgcgc
gcgcagcggcgcgcgccgcatctcacgcggcttctgcgcttcggttgcacgctggtcgtg
ctgatgatctggctcgcgtatctgcgcttcgagctggagctatggagcgggccgatcgcg
cggctcatcaagcacagcgcgatgacgcccggcttccggcacgcactcatcgccgtggtc
gcgacggtgttcggcgcgtggttcatctggattctgatcgacagcatcattctcgaagcg
ctcgggccgaacagttcgcgcaacaaggcgctgagccccggcgtgcgcgcccgcacgatg
ctcccgctcgtgcgcaacgccatcttcgtgacggtggcgacgctggcggccatcgtcgcc
tgcgcgacgctcggcatcaatctcacgccgctgctcgcgggcgccggcgtgatcggtctc
gcggtcggcttcggcgcgaagtcgctcgtcaccgatctcatcacgggactgttcatcatc
gtcgaggagacgatctcggtcggcgactggatcgatatcgacggcggtcatgccggcacc
gtgatggacctcacgatccgcacggtccgcctgcgcgacggtcagggcgcggtgcacacg
attccgttttcgcagatcaagatcgtgaagaatctctcgcgcgatttcgcgaatgcggtc
ttcgaaatcagggtgccgttctccgcgaagatggacgacatcaaccggatgatcgtggaa
gtgggcgcggagctgatgcaggactatcgctttcgccaggacattctcggtcccgtcgaa
atcttcgggctggatcgtttcgaggcgaactgcatcgtcgtgaaagggcagatcaagacg
cggccgttgcagcaatggagcgtggcgcgcgcgttcaacgcgaggctcaagctcaagatg
gacgaggcggggctggagatgctgttgccgcaaatgcagattcacgccgcgccgggcgag
cgcggcccggcggagggtcgtcacgccgcggagactccggcgcagccggagctccgcgtg
ctgaaggaatcgccctga
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