Burkholderia sp. YI23: BYI23_B003240
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Entry
BYI23_B003240 CDS
T01711
Name
(GenBank) DEAD_2 domain-containing protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
byi
Burkholderia sp. YI23
Pathway
byi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
byi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
BYI23_B003240
09124 Replication and repair
03420 Nucleotide excision repair
BYI23_B003240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
byi03021
]
BYI23_B003240
03036 Chromosome and associated proteins [BR:
byi03036
]
BYI23_B003240
03400 DNA repair and recombination proteins [BR:
byi03400
]
BYI23_B003240
Enzymes [BR:
byi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
BYI23_B003240
Transcription machinery [BR:
byi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
BYI23_B003240
Chromosome and associated proteins [BR:
byi03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
BYI23_B003240
DNA repair and recombination proteins [BR:
byi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
BYI23_B003240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
Motif
Other DBs
NCBI-ProteinID:
AET90931
LinkDB
All DBs
Position
2:complement(404506..406836)
Genome browser
AA seq
776 aa
AA seq
DB search
MLYMHTVSAPAYTVAVRALCEFTAKQGDLDLRFTPTPSAQEGVAGHVTVTGRRAAGYQKE
ISLSAEYGPLLVRGRADGYDPALNRLEEIKTHRGRLDSMPSNHRHLHWAQARVYGHLMCR
KLGLEAIEIALVYFDIVDQTESVLVETQSASALAAHFEAQCERFIAWARQELAHGAARNA
ALTALTFPHADFRPGQRALAEAVYRSAVSARCLAAQAPTGIGKTVGTLFPLLKAWPGQRL
DKIYFLTAKSAGRQLALDALTTLAATPLRVIELVARDKACEYPDRACHGESCPLARGFYD
RLAGARAAALECAQLDRAAIADVARRHEVCPYYLSQELSRWGDVIVGDYNYYFDTSAMLF
ALSEANRWRVAVLVDEAHNLVERARGMYSATLDQAAFNLMRRAAPPLLKKAFGRVARSWS
ETTAGQHAAHIDYAAHTEPPARFLTALGQAVSLMTEMLGEQPDAFTPDTLRFYFDAVHFT
RIAERFGTHSIFDITLSGAKSNAKKRHAVLCLRNVIPAPHLAPRFARAHSVALFSATLTP
AHFYADTLGLPASSVRIDVESPFCADQLDVRAIADLSTRYRDRERSVDRIADLIAAQFVR
AEGNYLSFFSSFEYLAQVAAALAARHPSIPCWQQSRAMSEAAQREFLARFVPDGRGVGFA
VLGGAFGEAIDLPGTRLIGAFVATLGLPQLNPVNQQMKACMHQAFGEGYAYTYLFPGLQK
VVQAAGRVIRGPLDRGVLYLIDDRFARAEVRRLLPAWWQVKVLRQRDLSGSRESPI
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
ctgctgtacatgcatacagtatccgcgcccgcctacaccgtcgccgtgcgcgcgctgtgc
gagttcacggcgaaacagggcgatctggatcttcgcttcacgccgacgccgagcgcgcag
gaaggcgtcgcgggtcacgtgaccgtcacgggccggcgcgcggcgggttatcagaaggag
atttcgctttcggcggaatacgggccgcttctcgtgcgcggccgcgccgacggctacgat
cccgcgctcaatcgcctggaagagatcaagacgcatcgcggcaggctcgattcgatgccg
tccaatcatcggcatctgcactgggcgcaggcgcgcgtctacgggcatctgatgtgccgc
aagctcgggctcgaagccatcgagatcgcgctcgtgtatttcgatatcgtcgatcagacc
gaaagcgtgctcgtcgaaacgcaaagcgcgagcgccctcgccgcgcatttcgaggcgcaa
tgcgagcgcttcattgcgtgggcgcggcaggaactcgctcacggcgcggcgcgcaatgcc
gcgctcacggcgctcacgtttccgcacgcggatttccggccgggccagcgcgcgcttgcc
gaagcggtgtatcgctcggcggtgtccgcgcgctgtctcgcggcgcaggcgcccacgggc
atcggcaaaacggtcggcacgctgttcccgctgctgaaggcgtggccgggccagcggctc
gacaagatctactttctcacggcaaaaagcgcgggacgccagcttgcgctcgatgcgctg
acgacgctcgcggccacgcccttgcgcgttatcgaactcgtcgcgcgcgacaaggcctgc
gagtatcccgaccgcgcgtgtcacggcgaatcgtgtccgcttgcgcgcggcttctacgat
cgcctggccggtgcgcgcgccgctgcgctcgaatgcgcgcagctcgatcgcgcggccatc
gcggacgtggcgcgccggcacgaggtctgtccgtactatctgagccaggagctgtcgcgc
tggggcgacgtgatcgtcggcgactacaactattacttcgataccagcgcgatgctgttc
gcgctctcggaggcgaatcgctggcgcgtcgcggtgctcgtcgacgaagcgcacaacctc
gtcgaacgcgcgcgcggcatgtactccgcgacgctcgatcaggccgcgttcaacctcatg
cgccgcgccgcgccgccgttgctgaagaaggcgttcggccgcgtcgcgcgaagctggagc
gagacgacggccgggcagcatgcggcccacatcgactacgccgcgcacacggaaccgccc
gcgcgctttctgaccgcgctcggccaggcggtctcgctgatgaccgaaatgctcggcgag
cagccggacgccttcacgcccgacaccctgcgcttctatttcgatgccgtgcacttcacg
cgcatcgcggagcgcttcggcacgcattcgatcttcgatatcacgctctcgggcgcaaag
tcgaacgcgaagaaacgccacgccgtactgtgtctgcgcaatgtgattcccgcgccgcat
ctcgcgccgcgtttcgcgcgcgctcacagcgtcgcgctcttttccgcgacgctcacgccc
gcgcatttctacgccgatacgctgggcttgccggcctcgagcgtgcgcatcgacgtcgaa
tcgcccttttgcgccgatcagctcgatgtgcgcgcgatcgcggatctgtccacgcgctac
cgcgatcgcgagcgctcggtcgatcgcatcgccgatctgatcgccgcgcagttcgttcgc
gccgagggcaactatctgagctttttcagcagtttcgaatatcttgcgcaggtcgcggcg
gcgctcgcggcgcggcatccgtcgattccgtgctggcagcaatcgcgcgcgatgagcgag
gccgcgcagcgcgagtttctcgcgcgcttcgtgcccgatggccgcggcgtcggcttcgcg
gtgctgggcggcgcgttcggcgaggcgatcgacctgcccggcacgcggctcatcggcgcg
ttcgtggcgacgctcggcctgccgcagttgaacccagtgaatcagcagatgaaggcgtgc
atgcaccaagccttcggcgaaggttacgcgtacacgtatctttttcccggcttgcagaaa
gtcgtgcaggccgccgggcgcgtgatccgcgggccgctcgatcgcggcgtgctctatctg
atcgacgaccgcttcgcgcgcgccgaagtgcgccgcctgctgcccgcctggtggcaggtg
aaagtgctgcgccagcgcgacctgagcggttcgagggaatcgcctatttag
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