Burkholderia sp. YI23: BYI23_B003340
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Entry
BYI23_B003340 CDS
T01711
Name
(GenBank) fimbrial biogenesis outer membrane usher protein
KO
K07347
outer membrane usher protein
Organism
byi
Burkholderia sp. YI23
Pathway
byi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
byi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BYI23_B003340
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
byi02000
]
BYI23_B003340
02044 Secretion system [BR:
byi02044
]
BYI23_B003340
02035 Bacterial motility proteins [BR:
byi02035
]
BYI23_B003340
Transporters [BR:
byi02000
]
Other transporters
Pores ion channels [TC:
1
]
BYI23_B003340
Secretion system [BR:
byi02044
]
Chaperone-usher system
Type 1 pilus assembly protein
BYI23_B003340
Bacterial motility proteins [BR:
byi02035
]
Pilus system
Fimbrial proteins
BYI23_B003340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usher
PapC_N
PapC_C
Big_6
Motif
Other DBs
NCBI-ProteinID:
AET90941
LinkDB
All DBs
Position
2:415501..418176
Genome browser
AA seq
891 aa
AA seq
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MKSSCKGQSNTLRNAKADSFVLNPLVAVALSLFAMTASTASVAAANAANQAVEFDTTFLQ
LDSKERVDIARFAHGNVVSPGVYAVDIWLNDIRIARQEVRFAAANPGESARACLTRPMLE
RFGLDFAKIAADGSQDASALAGAECIDLPAAVPDATVDFDFSEQKLVLSVPQKYMRNTAR
GYVSPELWDKGVNAAFLSYNANAYDSHSGGAHSTQSYLGLNAGVNIGGWHFRHQSSLTAA
TGQATQFDNIATYVQHDVPKLKAQATLGDAQTPGDVFDSVAFRGAQLSTDDRMLPESLRG
YAPVVRGTAASNARVTVRQGGQVIYETSVSPGPFEIRDLYATGYGGDLDVTVTEADGHAK
SFTVPYASVAQSLRPGTTRFAFTAGQLRDDSLQMKPGFTQFTVQRGLTDLVTVYGGGIAS
NGYAAANVGAALNTKYGAFAVDITGARTEIPGYQTMQGKSLHLGYSKFFDATDTNFTLGA
YRYSDTGYLGFADAARVRDYAQNGGNVMDRQRGRMQLTVNQPLKDHGSVFATASSQRYWN
RPGRDVFFQAGYSNSFKYGTYSVTAGRSVNADGTLSNEIMVSTSIPLGHSQHARQLSLNA
STGQGASGMQASVSGAAGERDQYSYNVYGSANSGSNAGVNANAGASGVYRAPYATVTASA
SGGANSSQMSAGVSGSIVAHPGGVTLSQTVGDTFAIVEAKGAQGATISSSKDVKVDSRGY
AVVPYMTPYGMNMVDIDPKGSSTDVEFQSTSESAAPRLGSIVMLKYKTVTGRAALIRAPR
LDGEPLPFGAGVTDGEGHVVGVVAQDSRIFARGLADKGALRVKWGDGASEQCNIGYTLSA
KTGPDMGYATVQSKCIDGWPTRTAGDSVHEAGQRAGAGGRRSITQERRDET
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcgtcatgcaaagggcaatccaacacgctgcgcaatgcgaaggctgattcattt
gttctgaatccgctggttgcagtggcgttgtcgctctttgcgatgaccgcgagcacggca
agcgtggcggccgcaaacgcagcgaatcaggcggtcgaattcgacacgactttcctgcag
ctcgattcgaaagagcgcgtcgatatcgcgcgcttcgcgcatggcaacgtcgtatcgccc
ggcgtgtacgccgtggacatctggctgaacgacatccgcatcgcacggcaggaagtgcgc
ttcgccgcggcgaatccgggcgaaagcgcgcgtgcttgcctgacgcgccccatgctcgaa
cgcttcggtctcgacttcgcgaagattgcggcggacgggtcgcaagacgcgagcgcattg
gccggcgccgaatgtatcgacctgcccgcagccgttcccgatgcaacggtcgacttcgat
ttctccgagcagaagctcgtgctctccgtgccgcaaaagtacatgcgcaacaccgcgcgc
ggatacgtgtcgcccgagttgtgggacaaaggcgtcaacgcggcctttctcagctataac
gcgaatgcgtacgacagccacagcggcggcgcgcattcgacgcagtcgtatctcggcctg
aacgcgggcgtgaacatcggcggatggcacttcaggcatcagtcgtcgttgacggcggcg
accggccaggcgacgcagttcgacaatatcgccacttacgttcagcacgacgtgccgaag
ctcaaggcgcaggcgacgctcggcgacgcgcaaacgcccggcgacgtcttcgacagcgtg
gcgtttcgcggcgcgcaactttcgaccgacgaccgcatgctgcccgaatcgctgcgcggc
tatgcgccggtcgtgcgcggcacggcggcgtcgaatgcgcgcgtgacggtgcgtcagggc
ggacaggtgatctacgagacgagcgtatcgcccgggcctttcgaaattcgcgatctgtac
gcgacgggctatggcggcgatctcgacgtgaccgtcactgaagccgatggtcacgcgaag
agcttcaccgtgccgtatgcatcggtggcgcaatcgttgcgccccggcacgacgcgcttt
gccttcaccgccggccagttgcgcgacgacagcctgcagatgaagcccggcttcacgcag
ttcaccgtacagcgcggcctgaccgatctcgtcacggtgtatgggggcggcattgcatcg
aacggctatgcggcggcgaatgtcggcgctgcgctgaatacgaagtacggcgccttcgcg
gttgacatcaccggcgcgcgcaccgagattcccggctatcagacgatgcagggcaagagc
ctgcatctgggctacagcaagttcttcgatgcaaccgacaccaacttcacgctcggcgcg
tatcgctattcggacacgggctatctcggcttcgcggatgcggcgcgcgtgcgcgactac
gcacagaacggcggcaacgtgatggaccgtcagcgggggcgcatgcaactgacggtcaac
cagccgctgaaggaccacggctccgtgttcgcgacggcgtcatcgcaacgttactggaac
cggccggggcgcgatgtgttcttccaggcgggctattcgaacagtttcaaatacggcacc
tatagcgtgacggccggacgttccgtcaacgccgacggcaccttgtccaacgaaatcatg
gtgagcacgagcattccgctgggtcattcgcaacacgcgcggcaattgagcctgaacgcg
agcaccgggcagggcgcatcgggcatgcaggcgagcgtgagcggcgccgcgggcgagcgc
gatcagtattcgtacaacgtgtacggctcggcgaactccggctcgaacgcgggcgtgaat
gcgaatgccggcgcgagcggcgtctatcgcgcgccgtatgcgacggtgacggcgtcggcg
agcggcggtgcgaattcgtcgcagatgtcggcgggcgtgagcgggtcgatcgtcgcgcat
ccgggcggcgtgaccttgtcgcagacggtcggcgatacgttcgccatcgtcgaagcgaag
ggggcgcagggcgcgacgatttcgagctcgaaagacgtcaaggtcgattcgcgcggttat
gcggtcgtgccgtatatgacgccgtatggcatgaacatggtggatatcgatccgaagggc
tcgtccaccgatgtggagttccagtcgacatcggaaagcgcggcgccgcgtctgggttcg
atcgtgatgctcaagtacaagaccgtcaccggccgcgccgcgttgatccgcgcgccgcgg
ctggacggcgagccgctgccgttcggcgccggcgtgacggatggcgaagggcatgtcgtc
ggcgtggtggcgcaggacagccgcatctttgcgcgcggtctcgcggacaagggcgcgctt
cgggtcaagtggggcgacggggccagcgagcaatgcaatatcgggtacacgttgtccgcg
aaaacaggaccggacatgggctatgccacggtgcaatcaaagtgtattgatggatggccg
accaggaccgcgggcgattcagtgcacgaagcgggacaacgtgccggcgcggggggtagg
cgttcgatcactcaggaaaggcgagatgaaacataa
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