Burkholderia sp. YI23: BYI23_B004220
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Entry
BYI23_B004220 CDS
T01711
Name
(GenBank) GAF modulated sigma54 specific transcriptional regulator, Fis family
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
byi
Burkholderia sp. YI23
Brite
KEGG Orthology (KO) [BR:
byi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
byi03000
]
BYI23_B004220
Transcription factors [BR:
byi03000
]
Prokaryotic type
Helix-turn-helix
Other families
BYI23_B004220
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
GAF
AAA_lid_14
PAS_4
Mg_chelatase
HTH_7
HTH_30
AAA_5
HTH_28
HTH_23
AAA_2
HTH_29
AAA_16
HTH_22
HTH_50
HTH_Tnp_ISL3
AAA
Zeta_toxin
AAA_3
Motif
Other DBs
NCBI-ProteinID:
AET91029
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Position
2:511872..513806
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AA seq
644 aa
AA seq
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MAPKGHGGRGGFGRSRRVTRQGGAMQAIGAALRPEQRDVIRHSHERSATFGLCETMRPDY
AVLSGAEFAVKLDESRALFAHALPVMETLYAQIANTHSMIALTDAGGLILHSLGDDDFLA
RAEKVALRAGAVWSEAHQGTNAIGTTLAERNAVTVHGDQHYLRANRFLTCSSVPILDPHG
NISGVLDVTGDRRGYHQHTMALVKMSAQMIENRLIASAFGDGLRIRFHSRPEFIGTLMEG
IAVFDLNGRLLCANRSAQFQFGHELGRLRALTLEGLFGERADTLIARSGEAPCRLELHSG
VVVFASVDFHARAASNVAHAASAVAVREPPRASGLDDLCTGDAQMNDIVARVRKVIGKNI
PILIGGETGAGKEMLARAIHADSPRRAGPFVAVNCASLPETLIESELFGYAQGAFTGAAK
RGATGKIVQANGGTLFLDEIGDMPLAMQSRLLRVLQERVVEPLGAARAVPVDFTLVCASN
RKLRECVAQGEFREDLYYRINGLSVTLPRLAARTDLRAVVDKLLRHERFAGRVVGIGDDV
LALFARHPWPGNFRQLSNVLCTASAMLDDHDTHIRVEHLPHDFVDELGERVPAHDAPAST
NGARLADIEAGAVAAALKAHGGNVSATARALGISRTTLYRKLRV
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
attgccccgaagggacacggcggacgcggcggcttcggccgaagccgccgcgtaacgcga
caaggaggggcaatgcaagccatcggcgcggccttgcggccggaacagcgcgacgtcatc
cgtcattcgcacgagcgttcggccacgttcggcctttgcgaaaccatgcgcccggactac
gccgtgctctcgggcgcggaattcgccgtcaagctcgacgaaagccgcgcgctgttcgcg
catgcgctgccggtcatggaaacgctgtacgcgcagatcgcgaacacgcacagcatgatt
gcgctgacggatgcgggcggcctcatcctgcattccctcggcgacgacgactttctcgcc
cgcgccgaaaaagtcgcgttgcgcgcgggcgcggtgtggagcgaggcgcatcagggcacc
aacgcgatcggcacgacgctcgccgagcgcaacgccgtcaccgtgcacggcgaccagcac
tatctgcgcgccaatcgtttcctcacgtgttcgagcgtgccgatcctcgatccgcacggc
aatatctcgggcgtgctcgacgtcaccggcgaccgccgcggctatcaccagcacacgatg
gcgctcgtgaaaatgtccgcccagatgatcgagaaccggctgatcgcgagcgcattcggc
gacggtctgcgcatccgctttcacagccggcccgagttcatcggcacgctgatggaaggt
atcgccgtcttcgatctcaacgggcggctgctctgcgcgaaccgcagcgcgcagtttcag
ttcggtcacgaactcgggcgtttgcgcgcgctgacgctcgaaggattgttcggcgaacgc
gcggatacgctcatcgcccggtcgggcgaagcgccttgccggctggaactgcatagcggc
gtggtggtgttcgcgagcgtcgatttccacgcgcgcgcggcatcgaacgtggcgcatgcg
gcgagtgccgtcgccgtgcgcgagccgccgcgcgcatccggcctcgacgatctctgcacc
ggcgacgcccagatgaacgacatcgtcgcgcgcgtgcgcaaggtcatcggcaagaacata
ccgattctgatcggcggggaaacgggcgcgggcaaggagatgctcgcgcgcgccattcac
gccgattcgccgcgccgcgcggggccgttcgtcgcggtgaattgcgcgtcgctgccggag
acgctgatcgaatccgaactgttcggctatgcgcagggcgcgttcaccggcgcggcgaag
cgcggcgcgaccggcaagatcgtgcaggcgaacggcggcacgctttttctcgacgagatc
ggcgacatgccgctcgcgatgcagagccgcctgctgcgtgtgttgcaggagcgcgtcgtc
gagccgctcggcgcggcgcgcgcagtgccggtcgatttcacgctcgtctgcgcgagcaac
cgcaagctgcgcgagtgcgtcgcgcaaggcgagttccgcgaggatctgtactaccgcatc
aacgggctttcggtaacgctgccgcgcctcgccgcgcgcaccgacttgcgcgccgtcgtc
gacaagctattgcgccacgagcgtttcgcgggccgcgtcgtcggcatcggcgatgacgtg
ctcgcgctattcgcgcgtcatccgtggccgggcaatttccggcagttgagcaacgtgctg
tgcaccgcgtccgccatgctcgacgatcacgatacgcacattcgcgtcgaacatctgccg
cacgatttcgtcgatgagctgggcgaacgcgtaccggcccacgacgcgccggcaagtacg
aacggcgcacgtctcgccgatatcgaagcgggcgcggtcgcggcggcgctcaaggcgcac
ggcggcaacgtatcggcgaccgcgcgcgcgctcggcatctcgcgcacgaccttgtatcgc
aagttgcgggtttag
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