Burkholderia sp. YI23: BYI23_B004950
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Entry
BYI23_B004950 CDS
T01711
Symbol
oppF
Name
(GenBank) oligopeptide ABC transport system ATP-binding protein OppF
KO
K10823
oligopeptide transport system ATP-binding protein
Organism
byi
Burkholderia sp. YI23
Pathway
byi01501
beta-Lactam resistance
byi02010
ABC transporters
byi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
byi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
BYI23_B004950 (oppF)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BYI23_B004950 (oppF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
BYI23_B004950 (oppF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
byi02000
]
BYI23_B004950 (oppF)
Transporters [BR:
byi02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
BYI23_B004950 (oppF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_22
SMC_N
AAA_13
AAA_29
ABC_ATPase
nSTAND1
NB-ARC
RsgA_GTPase
AAA_16
Yos1
ATP-synt_ab
AAA_5
PRK
RNA_helicase
AAA_18
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
AET91102
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All DBs
Position
2:588115..589098
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AA seq
327 aa
AA seq
DB search
MSDATILSVRDMRVHFQVKSKSRLPWAPRRTLKAVEGVSFDLKAGETLGVVGESGCGKST
LSRAILNLIPATSGDIVWMGATLSGASKREWHRVRADVQMIFQDPLASLDPRMTVGQIIA
EPLVEHRPGIGKRDIDERVRAIMAKVGLREQMINRYPHEFSGGQCQRIGIARALIVEPKL
VICDEPVSALDVSIQAQIVNLLKSLQKEMKLALIFIAHDLAVVRHISDRVMVMCLGRVME
LADKHALYETPRHPYTRALLSAVPVPDPSVERAKTVQILSGDIPSPIAPPSGCVFHTRCP
MAQPRCAREVPALRVLGPDASAACLFA
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgcgacgattctttccgtgcgcgacatgcgcgtgcattttcaggtgaagtcg
aaaagccgcctgccttgggcgccgcgccgcacgctgaaggcggtcgaaggcgtgagcttc
gatctgaaggcgggggagacgctcggcgtcgtcggcgaatcgggctgcggcaagtccacg
ctgtcgcgcgcgatcctgaacctgattcccgcgacgagcggcgatatcgtgtggatgggc
gcgacgctctcgggcgcatcgaagcgcgaatggcatcgcgtgcgcgccgacgtgcagatg
atctttcaggacccgctcgcgtcgctcgatccgcgcatgacggtcgggcagatcatcgcg
gagccgctcgtcgagcatcggccgggtatcggcaagcgtgacatcgacgaacgcgtgcgc
gcgatcatggccaaggtcggcctgcgcgaacagatgatcaaccgctatccgcacgagttt
tcgggcgggcagtgtcagcgcatcggcattgcgcgcgcgttgatcgtcgagccgaagctc
gtgatctgcgacgagccggtgtccgcgctcgatgtgtcgattcaggcgcagatcgtcaac
ctgctcaagtcgctgcaaaaggagatgaagctcgcgctcatcttcatcgcacacgatctg
gccgtcgtgcgccacatttccgaccgcgtgatggtcatgtgcctcggccgcgtgatggag
ctcgcggacaagcacgcgctctacgaaacgccgcggcatccgtacacgcgtgcgctgctg
tcggcggtgccggtgccggacccgtcggtggagcgcgcgaagaccgtgcagattctgtcc
ggcgatattccgagcccgatcgcgccgccttcgggatgcgtgttccatacgcgttgcccg
atggcgcagccccgctgcgcgcgcgaagtgcccgcgctgcgcgtgctcggcccggatgct
tcggcggcgtgcctgttcgcatga
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