Burkholderia sp. YI23: BYI23_B012780
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Entry
BYI23_B012780 CDS
T01711
Name
(GenBank) sarcosine oxidase, alpha subunit family
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
byi
Burkholderia sp. YI23
Pathway
byi00260
Glycine, serine and threonine metabolism
byi01100
Metabolic pathways
Module
byi_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
byi00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BYI23_B012780
Enzymes [BR:
byi01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
BYI23_B012780
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
BYI23_B012780
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
Pyr_redox_3
NAD_binding_8
HI0933_like
FAD_binding_2
NAD_binding_7
GIDA
DAO
XdhC_C
FAD_binding_3
Thi4
Pyr_redox
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
AET91885
LinkDB
All DBs
Position
2:complement(1485817..1488819)
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AA seq
1000 aa
AA seq
DB search
MSQKDRMSAGGRINRAIPVTFTFNGKTYQGFEGDTLASALLANGERFVARSWKYHRPRGI
ITAGVEEPNAVVQLETGAYTVPNARATEVELYQGLVATSVNAKPSIEKDRMAVNQKIARF
IPAGFYYKTFMWPRKLWPKYEEVIRDAAGLGEAPKQLDADRYDKCFAHCDVLVVGGGPSG
LAAAHAAGLSGARVILVDDQRELGGSLLSCRAEIDGKPALQWVQKIEAELRKMPDVKVLS
RSTAFGYQDHNLVTITQRLTEHLPVSRRQGTRELMWKVRAKRVILATGAHERPIVFGNND
LPGIMLASAVSTYLHRYAVLPGRNAVVFTNNDDAYQCALDLKAAGADVTVVDPRPAESKG
TLPAAARRYGVRVLNNAVITVAHGKYRVASVEVASYAKGQVGQKQTDLQCDLVAMSGGWS
PVLHLFAQSGGKAHWHDEKACFVPGKAMQKESSVGACAGEFSLSRGIRFGVDAGADAARA
AGHIVAKPSAVQVAEIVEAPMMPLWIVGNKELSTRGPKQFVDYQNDVSAADIYLAAREGF
ESVEHVKRYTAMGFGTDQGKLGNINGMAILAGALGKTIPETGTTTFRPNYTPVTFGTFAG
RELGEFLDPVRKTAIHEWHVENGAMFEDVGNWKRPWYYPKNGEDLHAAIARESLAVRQSV
GILDASTLGKIDIQGPDSAKLLNWMYTNPWSKLEVGKCRYGLMLDENGMIFDDGVTVRLG
EQHYMMTTTTGGAARVLTWLERWLQTEWPDMRVRLASVTDHWATFAVVGPNSRKVLQKVC
HDIDFANAAFPFMSYRDGTVAGAAARVMRISFSGELAYEVNVPANVGRAVWEALMLAGAE
FDITPYGTETMHVLRAEKGYIIVGQDTDGSMTPYDLGMGGLVAKSKDFLGKRSLTRSDTA
KQGRKQFVGLLTDDPSIVLPEGAQIVSGPFQGDTAPMLGHVTSSYYSPILKRSIALAVVK
GGLDKMGESVLIPLANGKRITAKITSSVFYDSEGARQHVE
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaaagatcgcatgagcgcgggcggacgcatcaaccgcgcgattcccgtgacc
ttcaccttcaacggcaagacgtatcagggcttcgaaggcgatacgctcgcttcggccctg
cttgccaacggcgagcgtttcgttgcgcgtagctggaagtatcaccgtccgcgcggcatc
atcacggcgggcgtcgaagaaccgaatgccgtggtgcagctcgaaaccggcgcgtacacc
gtgccgaacgcgcgcgcgaccgaagtcgagctctatcagggtctcgtcgcgacgagcgtg
aacgcgaagccgagcatcgagaaagatcgcatggcggtcaatcagaagatcgcgcgcttc
attcccgcgggcttctactacaagacgttcatgtggccgcgcaagctctggcccaaatac
gaagaagtgattcgcgacgcggcgggtctcggcgaagcgccgaagcaactcgatgccgac
cgctatgacaaatgcttcgcgcattgcgacgtgctcgtggtcggcggcggaccttcgggt
ctcgcggctgcgcatgccgcgggcctgtccggtgcgcgtgtgattctcgtcgacgatcag
cgcgaactcggcggctcgctcttgtcgtgccgcgccgaaatcgatggcaagcccgcgctg
caatgggtgcagaagatcgaagccgaactgcgcaagatgcccgacgtgaaggtactttcg
cgcagcacggcgttcggctatcaggatcacaacctcgtcacgatcacgcaacgtctgacc
gagcatctgcccgtttcgcgccgtcagggtacgcgcgaactgatgtggaaagtgcgtgcg
aagcgcgtgattctcgcgaccggcgcgcacgagcgtccgatcgtcttcggcaataacgat
ctgccgggcatcatgctggcgtcggcggtgtcgacgtatctgcatcgctacgcggtgctg
ccgggccgcaacgcggtcgtcttcacgaacaatgacgacgcgtatcaatgcgcgctcgat
ctcaaggccgcgggcgccgatgtgacggttgtcgatccgcgtcccgccgaatcgaagggc
acgttgcccgcggccgcgcgccgctatggcgtgcgcgtgctgaacaacgcggtcatcacc
gtcgcgcatggcaagtatcgcgtggcgtcggtcgaagtggcctcgtatgcgaaaggccag
gtcggccagaagcagaccgacctgcagtgcgatctcgtcgcgatgtcgggcggctggagc
ccggtgctgcatctgttcgcgcaatcgggcggcaaggcgcactggcacgacgaaaaggcg
tgcttcgttcccggcaaggcgatgcagaaggagagcagcgtcggcgcatgcgcgggcgaa
ttctcgctctcgcgcggcatccgcttcggcgtcgatgcgggcgcggacgcggcgcgcgcg
gcgggtcatatcgtcgcgaagccgagtgccgtgcaggtcgccgagatcgtcgaagcgccg
atgatgccgctgtggatcgtcggcaacaaggaactgtcgacgcgtggtcccaagcaattc
gtcgactatcaaaacgacgtgtccgccgccgacatctatcttgccgcgcgcgagggcttc
gaatccgtcgagcacgtcaagcgttatacggcgatgggcttcggcaccgaccagggcaag
ctcggcaacatcaacggcatggcgattctcgcgggcgcgctcggcaagacgattcccgaa
accggcacgacgaccttccgcccgaactacacgcccgtgactttcggcacgttcgcgggc
cgcgagctgggcgagttcctcgatccggtgcgcaagaccgcgatccacgaatggcacgtc
gaaaacggcgcgatgttcgaggacgtcggcaactggaagcgcccctggtactacccgaag
aacggcgaggacctgcacgcggcgattgcgcgcgagtcgctcgcggtgcgtcagagcgtc
ggcattctggatgcatcgacgctcggcaagatcgacattcaaggcccggattccgcgaag
ctgctcaactggatgtatacgaatccgtggagcaagctcgaagtcggcaagtgccgctat
ggcctgatgctcgacgaaaacggcatgatcttcgacgacggcgtgacggtgcgtctcggc
gaacagcactacatgatgacgacgaccaccggcggcgcggcgcgcgtgctgacgtggctc
gaacgctggctgcaaaccgaatggcccgacatgcgcgtgcgtctcgcatccgtcacggat
cactgggcgacgttcgcggtcgtcggcccgaacagccgcaaggtgctgcagaaggtgtgt
cacgacatcgacttcgcgaatgcggcgttcccgttcatgagctatcgcgacggcacggtg
gcgggcgcggcggcgcgcgtgatgcgcatcagcttctcgggcgagcttgcctatgaagtg
aacgtgccggcgaacgtcggacgcgcggtgtgggaagcgctgatgctcgcgggcgcggaa
ttcgacatcacgccgtacggcaccgaaacgatgcacgtgctgcgcgcggagaagggctac
atcatcgtcggccaggatacggatggctcgatgacgccttacgacctcggcatgggcggg
ctcgtggcgaagtcgaaggacttcctcgggaagcgttcgctcacgcgttcggatacggcg
aagcagggacgcaagcagttcgtcggcctgctgacggacgacccttcgatcgtgctgccc
gaaggcgcgcagatcgtatcgggtccgttccagggcgacaccgcgccgatgctcggtcac
gtcacgtcgagttattacagtcccattttgaagcgttcgatcgcgctcgccgtcgtgaag
ggcggtctcgacaagatgggcgaatcggtgctgatcccgcttgcgaacggcaagcgcatc
accgcgaaaatcaccagttcggtgttctacgacagcgaaggagcacgtcagcatgttgaa
tga
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