KEGG   Burkholderia sp. YI23: BYI23_C008870
Entry
BYI23_C008870     CDS       T01711                                 
Name
(GenBank) ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
byi  Burkholderia sp. YI23
Pathway
byi03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:byi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    BYI23_C008870
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:byi03400]
    BYI23_C008870
DNA repair and recombination proteins [BR:byi03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     BYI23_C008870
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: AET93033
LinkDB
Position
3:1041569..1042495
AA seq 308 aa
MPARSIASLSLSFGLVSIPVKLYSATESASDVRFNLLAPDGARVKQQYVSDSTGEVVERS
AMKKGYEFEKGRYVVFTGDELKALEEGASHVVEIVSFVPEKSVDPIFYDKAYFIAPDKRG
GKPYSLLQQALAQSGRCALAKWSYKGKTRVVQVRPAEDGMVFQQLLFADEVRSLKDLNIE
HVSVSDAELKLALQIIEQGTEDAYDAAAYEDEEKKRILAAIDRKIEGKEVVSPQAEEPAA
GGEVIDLMEALRASLAKTSAKPKAAGPAKRKAAAAEAEEAIDVPKVRKPAARAQKVAAEA
PARTRARK
NT seq 927 nt   +upstreamnt  +downstreamnt
atgccggcacgctcgattgcatctctgtcactctcgttcggactcgtctcgatacccgtc
aagctctactcggccacggagagcgcgtcggatgtccgcttcaatcttctcgctccggac
ggcgcgcgcgtcaaacagcaatacgtatccgattccacgggcgaagtcgtcgaacggtca
gccatgaaaaagggctacgagttcgaaaaaggccgctatgtcgtcttcacgggcgacgaa
ctgaaggcgctggaagaaggcgcgagccatgtcgtcgagatcgtttcgttcgtgccggag
aaatccgtcgatccgatcttctatgacaaggcctatttcatcgcgcccgacaagcgcggc
ggcaagccgtacagcctgctccagcaggcgctcgcgcaaagcggacggtgcgcgctggcg
aagtggtcgtacaagggcaagacccgcgtggttcaggtgcgccccgccgaagacggcatg
gtcttccagcaactccttttcgccgacgaagtgcgttccctcaaggatctgaatatcgaa
cacgtgtcggtgtcggatgcggagttgaagctcgcgcttcagatcatcgagcaaggcacc
gaagacgcctacgacgccgccgcctacgaagacgaggaaaagaaacgcatcctcgccgcg
atcgaccggaagatcgagggcaaggaggtcgtctcgccgcaagccgaagaacccgcggcg
ggcggcgaagtcatcgacctgatggaggcgttgcgcgcaagcctcgccaaaacgagcgcg
aagccgaaggccgcggggccggcaaagcgcaaggccgcggcggcggaagccgaagaagcc
atcgacgtgccgaaggtcagaaagcccgccgcgcgggctcagaaagtcgcggcggaagca
ccggccaggacgcgtgcgcgcaagtga

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