Burkholderia sp. YI23: BYI23_C011530
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Entry
BYI23_C011530 CDS
T01711
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
byi
Burkholderia sp. YI23
Pathway
byi00260
Glycine, serine and threonine metabolism
byi00460
Cyanoamino acid metabolism
byi00630
Glyoxylate and dicarboxylate metabolism
byi00670
One carbon pool by folate
byi00680
Methane metabolism
byi01100
Metabolic pathways
byi01110
Biosynthesis of secondary metabolites
byi01120
Microbial metabolism in diverse environments
byi01200
Carbon metabolism
byi01230
Biosynthesis of amino acids
byi01240
Biosynthesis of cofactors
byi04981
Folate transport and metabolism
Module
byi_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
byi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
BYI23_C011530
09102 Energy metabolism
00680 Methane metabolism
BYI23_C011530
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BYI23_C011530
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
BYI23_C011530
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
BYI23_C011530
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
BYI23_C011530
Enzymes [BR:
byi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
BYI23_C011530
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
AET93299
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Position
3:complement(1351973..1353220)
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AA seq
415 aa
AA seq
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MFNRATSTVENVDPELWAAITDENKRQEDHIELIASENYTSPAVMAAQGSQLTNKYAEGY
PGKRYYGGCEYVDVVEQLAIDRIKQIFGAEAANVQPNSGSQANQGVFFAMLQPGDTIMGL
SLAHGGHLTHGSPVNMSGKWFKVVSYGLNEAEDIDYEAAEQLAKEHKPKLIVAGASAFAL
KIDFERLSKIAKSVGAYLMVDMAHYAGLIAAGVYPNPVPHADFVTTTTHKSLRGPRGGVI
LMKEEYAKQINSAIFPGIQGGPLMHVIAAKAVAFKEAQSPEFKAYQQQVVDNARVLAETL
VKRGLRIVSGRTESHVMLVDLRAKKITGKAAEAALGAAHITVNKNAIPNDPEKPFVTSGI
RLGSPAMTTRGFGTKEAEIVGNLIADVLEAPEDAGNLERVRQQVAELTKRFPVYG
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgttcaatcgcgcaaccagcaccgttgaaaacgtcgatccggaactctgggcggccatc
acggatgaaaacaaacgacaggaagatcacatcgagctgatcgcgtcggaaaactacact
tcgccggccgtgatggcggcgcaaggttcgcaactcacgaacaagtacgcggaaggttat
cccggcaagcgttactacggcggttgcgaatacgtggacgtggtcgagcagctcgcgatc
gatcgcatcaagcagattttcggcgcagaggccgcgaacgtgcagcccaattcgggctcg
caggccaaccagggcgtgttcttcgcgatgctgcagcccggcgacaccatcatgggcctg
agcctcgcgcacggcggccacctgacgcacggctcgcccgtcaatatgtcgggcaagtgg
ttcaaggtcgtgagctacggcctgaacgaagccgaagatatcgattacgaagccgccgag
cagctcgccaaggagcacaagccgaagctgatcgtcgcgggtgcatcggcgtttgcgctg
aagatcgatttcgagcgtctttcgaagatcgcgaagagcgtcggcgcctatttgatggtg
gacatggcgcactatgccggcctgatcgcggcgggcgtctatccgaacccggttccgcat
gcggacttcgtcaccacgacgacgcacaagagcctgcgcggcccgcgcggcggcgtcatc
ctgatgaaggaagagtacgccaagcagatcaattcggcgattttccccggcattcagggc
ggcccgctcatgcacgtgatcgccgcgaaggccgtcgcgttcaaggaagcgcagtcgccg
gaattcaaggcgtatcagcagcaggtcgtcgataacgcgcgcgtgctggccgaaacgctg
gtgaagcgcggcctgcgcatcgtgtcgggccgcacggaaagccatgtgatgctggtcgat
ctgcgcgcgaagaagatcaccggcaaggccgcggaagccgcgctcggcgccgcgcatatc
acggtcaacaagaacgccattccgaacgatccggaaaagccgttcgtcacgagcggcatc
cgcctcggctcgcccgcaatgaccacgcgcggcttcggcacgaaggaagcggagatcgtc
ggcaacctgatcgccgatgtgctcgaagcgccggaagacgcgggcaatctggaacgcgtt
cgtcaacaagtcgctgaactgacgaagcgcttccccgtctacggctga
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