KEGG   Burkholderia sp. YI23: BYI23_C011900
Entry
BYI23_C011900     CDS       T01711                                 
Symbol
hsdR
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
byi  Burkholderia sp. YI23
Brite
KEGG Orthology (KO) [BR:byi00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:byi02048]
    BYI23_C011900 (hsdR)
Enzymes [BR:byi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     BYI23_C011900 (hsdR)
Prokaryotic defense system [BR:byi02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   BYI23_C011900 (hsdR)
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N T1R_D3-like ResIII T1RH-like_C DEAD DraIII
Other DBs
NCBI-ProteinID: AET93336
LinkDB
Position
3:1387475..1390561
AA seq 1028 aa
MTDQIGKSEKATQNRIVKLFTKQLGYAPLGDWTDRSGNSNIEESLLTAYLTDAGYRPAQI
GQAIYRLKTEANHPQRGLYANNEAVYQLLRYGIPVKVEGDKVADTVWLIDWARPLRNHFA
VAEEVTLKGGYERRPDIVLYINGIAIGVLELKNSRVSIGNGIRQNLSNQRPEFNGWFFST
VQFVFAGNDSEGLRYGTTNTPEKFFLRWKEDEAENSGYKLDKYLLKMCEKVRLVELMHDF
VLFDGGIKKLPRVHQYFGIKSAQEHVRKRQGGIIWHTQGAGKSILMVLFARWILENNPHA
RVVVITDRDELDKQIKRVFESSGEKIYRTSSGRDLMTQLSQPAPRLLCSLVHKFGAGKGL
SDGDFDAFIKELASQPSVAVGDLFVFVDECHRTQGGRLNRVMKAMMPSAVFIGFTGTPLL
KRDAATSLEVFGSYIHTYKYSEAVEDRVVLDLVYEARDIDQALGSQDKIDTWFEAKTKGL
NDWQKNELKKQWGTMQQVLSSRARMDRVVEDIIFDFSTKPRLSSERGNAMLVASSIYEAC
KYFSLFQKTPFKGRCAVITSYNPLTKDVTLEEIGANTETDKQFIYNTYTDLLANVQPKAG
MSKTETYEDQAKARFIKEPAAMKLLIVVDKLLTGFDAPPCSYLYIDKSMQDHGLFQAICR
TNRLDTDDKDFGYIVDYKDLFKKVEKAVAVYTSELDHSTGGAQSDVLLESRVKKGRERLD
GTLEALALLVEKVQPPKGELEHIRYFCGNTEVASDLSEREPQRVAFYTGVVGLLRAYASI
ADELDEAGYDAAQQASIRQQLDSYVKLRETIRLASGETLDLKPYEADMRHLIDTYISASE
PRKISEFENIGLLDLIVKTGVADAIAKKLGAMKDRQSVAETIENNVRSKIVKDHLTDPAY
FAKMSALLDEIVKKRKEKAIDYEEYLKQMADLAEKVQSGKADGTPAALDTAGKRALFNNL
KAAGSHTSEQALNLALEIDAAIRRVRPDGWRGVLPRENVIKQALWDILGDDSEVERIFLI
IEAQRQEY
NT seq 3087 nt   +upstreamnt  +downstreamnt
atgaccgaccaaatcggcaaatcagaaaaagccacacaaaaccgcatcgtcaagctgttc
accaagcagttaggctatgccccgctcggagactggaccgatcgctcaggcaacagcaac
atcgaggaaagtctgctgacggcctatctgaccgacgccggttatcgtcccgcgcaaatc
ggtcaggccatctaccgcctaaagactgaggcgaaccatccgcagcgtggcctgtacgcg
aacaacgaggcggtctaccagctcctgcgctacggtattcccgtcaaggtcgagggcgac
aaggtggccgacacggtctggctcatcgattgggcacggccgctgcgcaaccatttcgcg
gttgccgaagaagtcacgctaaaaggcggctacgagcgccgcccagacatcgtgctctac
atcaacggcatcgccattggcgtgcttgaactgaaaaacagccgcgtcagcatcggtaac
ggcatccgccagaacctgtctaaccagcggcccgaattcaatggctggttcttcagtacg
gtgcagtttgtattcgcaggtaatgattcggaaggtctgcgctacggaacgaccaacacg
ccggagaaattctttcttcgatggaaagaagatgaagccgagaacagcggctacaagctg
gacaagtacctgctgaagatgtgcgagaaagtccgactcgtggagttgatgcacgacttc
gtcctgttcgacggcggaatcaagaagctgccacgcgtccaccagtatttcggcatcaag
tccgcgcaggagcatgtgcgcaaacgccaaggcggcatcatttggcatacacagggcgca
ggcaagagcattctgatggtgctcttcgcccgctggattctggagaacaatccgcatgcg
cgggtcgtcgtcatcaccgatcgcgacgaactggataagcagatcaagcgtgtctttgag
agcagcggagaaaaaatctaccgcaccagtagtgggcgcgacctgatgactcaactgagc
cagccggccccacgtctgttgtgctcgctggtacacaagttcggcgcgggcaaaggtctc
agcgacggcgatttcgatgccttcatcaaggaacttgcttcccagccaagcgtggccgtt
ggcgatctttttgtgtttgtcgacgagtgccaccgtacccagggcggccgcctgaaccga
gtcatgaaagcgatgatgccgtcggcggtattcatcggctttaccggtacgccgctgctc
aagcgcgatgcggcaaccagcctggaagttttcggcagctatatccatacctataaatac
agcgaggcggtcgaggaccgcgtggtgctcgatctggtctacgaggcgcgggatatcgat
caggcactcggctcccaagacaagatcgatacctggttcgaggccaagaccaaaggtctg
aacgattggcagaagaacgaactgaaaaagcagtggggcacgatgcaacaagtgctcagt
tcgcgcgcgcgcatggatcgcgtggtcgaagacatcatcttcgacttcagtacgaagcca
cggctgtccagtgaacgcggcaatgcaatgctcgtggcttccagcatctacgaggcatgc
aagtatttctcgctgttccagaaaaccccgttcaagggtaggtgcgcggttatcacgtcc
tataacccgctcacgaaagacgtgacgctcgaagaaatcggcgcgaataccgaaaccgat
aagcagttcatctacaacacctacaccgacctcttggcgaacgtacagccgaaggctggt
atgtcgaagactgagacctacgaggaccaggccaaggcccgtttcattaaggaaccggcc
gccatgaagctgttgatcgtggtagacaagctactgactggcttcgatgcgccgccttgc
agctatctctacatcgacaaatcaatgcaggatcacggcttgtttcaggccatctgccgc
accaatcgcctggataccgatgataaggattttggctacatcgtcgattacaaggatctg
ttcaagaaggtggaaaaggcagtcgcggtatatacgtccgagctggaccacagcacgggc
ggtgctcaatccgacgtcctgctcgaaagccgagtgaaaaaaggacgcgagcgtctggac
gggacgcttgaggcgttggccctgctggtcgagaaggtgcagccgcccaagggcgaactg
gaacacatccgatatttttgcggcaataccgaggtcgccagtgacctgagcgaacgggag
cctcagcgtgttgctttctatacaggcgtggttggcctattgcgcgcttatgccagcatt
gcggatgagttggacgaggccgggtacgacgcggcacagcaggcatcgatccggcagcag
ctcgattcgtacgtgaagctgcgggaaacgatccggctggcgagcggcgagacgcttgac
cttaagccgtatgaagctgacatgcgccatttgatcgatacctatatctcagccagcgag
ccgcgcaagatttccgaatttgagaacatcggtctgctcgacctgatcgtgaagacaggc
gtagccgatgcgattgcgaagaaactcggtgccatgaaagaccgtcagtcggtcgccgaa
accatcgagaacaacgttcgtagcaagatcgtcaaggatcacctgaccgaccctgcttac
ttcgccaaaatgtccgcgctgctcgacgagatcgtcaagaaacgcaaggaaaaggccatc
gactatgaagagtatctaaagcagatggccgatctggcagagaaggttcagagcggcaag
gctgacggtacgcctgccgcactggatacggccggcaagagggcgctgttcaacaatctg
aaagccgctggtagccatacctcggaacaggcgctgaatttggcgcttgaaatcgacgcg
gctatcagacgtgttcgtcccgatggttggcgtggtgtgctgccgcgcgaaaacgtcatc
aagcaagcgctgtgggatatccttggggacgattctgaagtcgagcgtatcttccttatt
atcgaagcccaacgacaggagtattga

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