Burkholderia sp. YI23: BYI23_D007650
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Entry
BYI23_D007650 CDS
T01711
Name
(GenBank) Fis family GAF modulated sigma54 specific transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
byi
Burkholderia sp. YI23
Brite
KEGG Orthology (KO) [BR:
byi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
byi03000
]
BYI23_D007650
Transcription factors [BR:
byi03000
]
Prokaryotic type
Helix-turn-helix
Other families
BYI23_D007650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
GAF
AAA_lid_14
PAS_4
HTH_30
AAA_5
HTH_23
HTH_Tnp_ISL3
HTH_28
HTH_29
Parvo_NS1
HTH_22
AAA
NUMOD1
HTH_7
AAA_16
AAA_2
MCM
HTH_50
HTH_1
P22_Cro
HTH_17
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AET94275
LinkDB
All DBs
Position
byi_1p:872286..874229
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AA seq
647 aa
AA seq
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MQDDIREITASHDDRHNAWLIPSIRKAHERSETFGLNATTRPDYDVLTEGELLLKLEQNR
VLCAHATPVMETLREQIVNTQSMIVLTDAQGLILHSTGDDDFLARAEKVALRAGANWAEE
RQGTNAIGTAIAERSATVVHGDQHYLAANRFLTCSSVPILDPYGDLIGVLDVTGDHRSYH
RHTMALARMSVQMIENHLFSSTFQGMLQIAFHGRAEFLGTLMEGIMAFTCDGRFLSANRS
AQFQFGLPLSALRAHTLSSLFGLTSAQLIDRSHASRAPHITLDLNNGTVVCARVRLNRTP
IAEMSSAPATVRPAPRASTPVDASSRLASLDTGDPKVAAVLGKVRKVIGKDITVLITGET
GTGKELLAQAIHSDSPRRAGPFVAVNCASIPENLIESELFGYEEGAFTGARRKGAAGKLL
QANGGTLFLDEIGDMPYPLQVRLLRVLQERVVDPLGSSKSIPVDVAIICATHRNLRDMIE
QNRFREDLYYRLNGLVVKLPPLRERTDLAAVITKMLHAVSADEACGMRLSIDDEVMALFE
RYAWPGNFRQLCNLLRTAAAMVDGDGCIRREHLPEDFFDEPRISAQSVSESCASSALGSG
RLEEVTASVIAAALARHRGNVSAAARALGISRNTIYRKMPACSAMEQ
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgcaagacgatatccgtgaaatcacggcttcccacgacgaccggcacaacgcctggctc
attccgtcgatccgcaaggcgcatgagcgctcggagacgttcggtctgaacgccacgacg
cggcccgactacgatgtgctgaccgaaggcgaactcctgctcaagctcgaacagaatcgc
gtgctgtgcgcgcacgcgacgccggtgatggaaacgctgcgcgaacagatcgtcaacacg
caaagcatgatcgtgctgaccgacgcgcaagggctcatcctgcattcgacgggcgacgac
gacttcctcgcgcgcgctgaaaaggtcgcgctgcgggccggcgcaaactgggccgaggaa
cggcaaggcaccaacgcgatcggcacggcgatcgcggaacgttccgcgaccgtcgtgcat
ggcgaccagcactatctcgccgcgaaccgctttctcacgtgttcgagcgtgccgatcctc
gatccctacggcgacctcatcggcgtgctcgacgtgacgggcgatcatcgcagctaccat
cgccacacgatggcgctcgcgcgcatgtccgtgcagatgatcgaaaaccacctgttttcc
agcacgtttcagggcatgttgcagatcgcgtttcatggccgcgccgaatttctcggcacg
ctgatggaaggcatcatggccttcacctgcgacgggcgctttctttcggccaatcgcagc
gcgcagtttcagttcggcctgccgctctccgcgctgcgcgcgcatacgctctcgtcgctg
ttcgggctgacgagcgcgcaactgatcgaccgttcgcacgcgagccgcgcgccgcatatc
acgctcgacctgaacaacggaaccgtcgtgtgcgcgcgggtgcgcctcaatcgcacgccg
atcgccgagatgagctccgctccggcaacggtccggcctgcaccacgcgcctcgactccg
gtcgatgcatcgtcgaggctcgcgtcgctcgacacgggcgatccgaaagtggccgccgtg
ctcggcaaggtgcgcaaggtcatcggcaaggacatcacggtgctcatcacaggcgaaacg
ggcacgggcaaggaactgctcgcgcaggccatccatagcgattcgccgcgccgcgcgggg
ccgttcgtggccgtgaattgcgcatcgattcccgagaacctgatcgaatcggagctcttc
ggttacgaggaaggcgcgtttacgggcgcacggcgcaagggcgcggccggcaagctgttg
caggcgaacggcggcacgctctttctcgacgagatcggcgacatgccctatccgctgcaa
gtgcgcctcctgcgcgtgttgcaggaacgcgtcgtcgatccgctcggttcgagcaaatcg
ataccggtcgatgtcgccatcatctgcgcgacgcatcgcaacttgcgcgacatgatcgag
cagaaccgctttcgcgaagacctgtattaccgcctgaacggactcgtcgtgaagctgccg
ccgttgcgcgagcgcaccgatctcgcggccgtcatcacgaagatgctgcacgccgtgagc
gccgacgaagcgtgcggcatgcgcctgtccatcgacgacgaagtgatggcgcttttcgag
cgctacgcgtggcccggcaacttccggcaactatgcaatctgctgcgcaccgccgccgcg
atggtggacggcgacggctgcattcgccgcgaacatcttcccgaagatttcttcgacgag
cctcgcatcagcgcgcaaagcgtgtccgaatcgtgtgcttcatcggcgcttggatcgggc
cgtctcgaagaagtcacggcatcggtgatcgcggccgcgctcgcgcgtcatcgcggcaat
gtctccgccgccgcgcgcgcattggggatttcccgcaacacgatctatcgaaagatgccg
gcctgttcagcaatggagcaatga
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