Burkholderia sp. YI23: BYI23_D008830
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Entry
BYI23_D008830 CDS
T01711
Name
(GenBank) phage SPO1 DNA polymerase-related protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
byi
Burkholderia sp. YI23
Pathway
byi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
byi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BYI23_D008830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
byi03400
]
BYI23_D008830
Enzymes [BR:
byi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BYI23_D008830
DNA repair and recombination proteins [BR:
byi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BYI23_D008830
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
AET94393
LinkDB
All DBs
Position
byi_1p:complement(1006931..1008358)
Genome browser
AA seq
475 aa
AA seq
DB search
MRVIAIDDDFDAWRAAALDALAQGLAPESVDWRTSQAAPALFGDTAAHVASADAPQIRVS
RELAALLKDAAHFRDARRWSFLYRVLWRWARGDRAAASPADEDGARLYKMAKAVRRAQHD
MIAYVRFRQRDPSLGAPEYVAWYEPDHDVLAWGAEHFAARMGRSTWLIATPDGAAMFDGE
RLQLERRRALASDHASQHAPDTPDAAEALWMTYYRSIFNPARLNESALEQHMPVRFWKGL
PEGALIPQLVSDARGGARRVAQAPRVGALGGKAVQVDANEAQPERDAPTSLDTCRRCDLW
RNATQAVGGAGPADARIMLLGEQPGDQEDLKGEPFVGPAGQLLDDAMQRAGVPREQVYLT
NAVKHFKWEPRGKRRLHKTPAQQEVEACSYWLDQELQRTGARVIVTLGATALSALFGRRA
TLSAHIGRVVPYGDRLVVATYHPSYALRQNDEAARERTVAAIVAALDQARELASK
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtcatcgccatcgacgacgatttcgacgcctggcgcgccgccgcgctcgatgcg
ctcgcgcaagggcttgcgcccgagtcggtggactggcgcacgtcgcaggcggcgcccgcg
ttgttcggcgacaccgcggcgcatgtcgcttcggccgacgcgccgcagatccgcgtgtcg
cgcgagctcgctgcgctattgaaagacgccgcccatttccgcgatgcgcgccgctggagt
tttctgtatcgcgtgctgtggcgctgggcgcggggcgaccgcgcggcggcatcgcccgcg
gacgaagacggcgcgcgtctctacaagatggcgaaggccgtgcgccgcgcgcagcacgac
atgatcgcgtatgtgcgctttcgtcagcgcgacccctcgctcggcgcgcccgagtacgtc
gcctggtacgagccggaccacgacgtgctcgcctggggcgcggagcatttcgcggcgcgc
atgggccgctcgacgtggctcatcgcgacgcccgacggcgcggccatgttcgacggcgaa
cgcctgcaactggagcgccgccgcgcgctggcatcggaccacgcgagccaacatgcgccc
gatacgcccgacgccgccgaagcgctctggatgacctactaccgcagcattttcaatccc
gcgcgcctgaacgaatccgcgctcgaacagcacatgcccgtgcgcttctggaaaggcttg
cccgaaggcgcgctcattccgcaactcgtgagcgatgcgcgcggcggcgcacggcgcgtc
gcgcaggcgccgcgcgtgggcgcgctcggcggcaaggcggttcaggtcgatgcgaacgag
gcgcagcccgaacgcgatgcgcccacctcgctcgatacgtgccgccgctgcgatctgtgg
cgcaacgcgacgcaggccgtgggcggcgcggggccggcggatgcgcgcatcatgttgctc
ggcgagcagccgggcgatcaggaggatctgaagggcgagccgttcgtcgggccggcggga
caattgctcgacgacgcgatgcaacgcgccggcgtgccgcgcgaacaggtctacctgacc
aacgcggtgaagcacttcaaatgggagccgcgcggcaagcgccgtctgcacaagacgccc
gcgcagcaggaagtcgaggcgtgttcctactggctcgatcaggaattgcagcgcaccggc
gcgcgcgtgatcgtcacgctcggtgcgaccgcgctctcggcgctgttcggccggcgggcg
acgctctcggcccacatcgggcgggtcgtgccgtatggcgacaggcttgtagtagcgacc
tatcacccgtcgtatgcgctgcggcagaacgacgaggccgcgcgcgagcgaaccgtcgcg
gccatcgtcgcggcgctcgaccaggcgcgcgaactcgcgtccaaataa
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