Burkholderia sp. YI23: BYI23_D012120
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Entry
BYI23_D012120 CDS
T01711
Symbol
papC
Name
(GenBank) putative fimbrial biogenesis outer membrane usher protein PapC
KO
K07347
outer membrane usher protein
Organism
byi
Burkholderia sp. YI23
Pathway
byi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
byi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BYI23_D012120 (papC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
byi02000
]
BYI23_D012120 (papC)
02044 Secretion system [BR:
byi02044
]
BYI23_D012120 (papC)
02035 Bacterial motility proteins [BR:
byi02035
]
BYI23_D012120 (papC)
Transporters [BR:
byi02000
]
Other transporters
Pores ion channels [TC:
1
]
BYI23_D012120 (papC)
Secretion system [BR:
byi02044
]
Chaperone-usher system
Type 1 pilus assembly protein
BYI23_D012120 (papC)
Bacterial motility proteins [BR:
byi02035
]
Pilus system
Fimbrial proteins
BYI23_D012120 (papC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usher
PapC_C
Motif
Other DBs
NCBI-ProteinID:
AET94722
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All DBs
Position
byi_1p:complement(1377866..1380268)
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AA seq
800 aa
AA seq
DB search
MLARSALRVRAACGFIALCVISSKVVAQDDITGGPPVDMPNLAGAPRAMPAASPPGAAQT
LVLEIVLNGASLGEPVTFQLRDGQLYAEPSTLENAGVRVNDLMPDRDGWLALSSIPGLRA
EYSVAKQQAILQVGEARRVTQRIGYRTPSTPKATPGTGFVLNYDISYLRNVGEVHDDQFG
VWSEQRFFTHYGVFDNTGTYLNGTGLNRYTRLDTNWTYSRPSTLFTMTVGDTISGSLAWS
RSVRYAGIQLQRDFSLRPDLITFPLPVFAGSAAVPSAVDLYINGLRQYSGNAAPGPFQIS
QPPSLTGAGVAQVVVTDALGRRVTTSIPLYIDTKLLAKGLSNYSVDVGFLRDNYTITSND
YESSPIFSGLYSYGVSDWFTLQAHAEGGQGLSNGGAGAIVGIGNAGVISTAAAGSRLRGM
TGALLSVGYQYIGPKFSLTAQATRATDGYRDIGALSGTSLFEHIYQSTASVALGRGQSAS
LSYIDSLDSFAGHARVVTLAYNAQLGRRWSLFATAYRDFLQRDVWGGSIGVTIALGGNTS
VATTLAQNGGHMTADVTASRPADFSGGWGWSVQGGAGADYRHAFAGANYRASFGDFQATA
QRFNGVTTATAEAAGALVVMDGTVLPSRTLTDGFALVSTDGIARVPVLQENRLVGATNRR
GYLLVPDLTSYQRNQIAIDPLALPADVRIERTGLDIAPERRSGALAHFGMERYRGASVSF
VDANGRALPPGATATTASGAAATVGYDGIAFFDKLDASNTVTIRGKDLDCTAHVAYETPA
AGTLAQLGPVPCIANRSDGR
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcgcgttctgcccttcgcgtacgcgccgcgtgcgggttcattgcgctctgcgtg
atctcgtcgaaagtcgttgcgcaagacgacatcaccggcggcccgcccgtcgacatgccg
aatcttgccggcgcaccacgcgcgatgccggccgcgagcccaccgggggcggcgcaaacg
ctcgtactcgaaatcgtgctcaatggcgcgagccttggcgaacctgtgacgttccaactg
cgcgacggccagttgtatgcggagccatcgacgctggaaaacgcgggcgtgcgcgtcaac
gacctcatgccggacagggatggctggctcgcgctttcatcgattccggggctgcgcgcc
gagtattccgtcgcgaaacagcaggccattctgcaagtgggcgaagcgcggcgcgttaca
caacgaatcggctatcgcacgccgtccacgccgaaagcgacgcccggcaccggcttcgtg
ctcaactacgacatttcgtatctgcgcaatgtcggcgaggtccacgatgaccagttcggc
gtctggagcgagcagcgctttttcacgcactacggcgtgttcgacaacactggcacttat
ctgaacggcacgggcctgaaccgctatacgcggctcgacaccaactggacgtattcgcgc
ccgtcgacgctgttcacgatgaccgtcggcgatacgatttccggctcgctcgcgtggtcg
cgctcggtgcgctatgccggtatccagttgcagcgcgacttcagcctgcgtccggatctg
atcacgtttccgctgccggtgttcgcgggttcggcggcggtgccatcggccgtggatttg
tatatcaacggcctgcgtcagtacagcggcaacgcagcgcccggcccgttccagatttcg
cagccgccgagcctgacgggtgcgggcgtcgcgcaggtcgtcgtgaccgatgcgctcggt
cgccgcgtgacgacgagcattccgctttacatcgatacgaagctgctcgcgaaaggcttg
tcgaactattcggtcgatgtcggctttctgcgcgacaactacacgatcacttccaacgat
tacgagtcgtcgccgatcttcagcggcctctacagctacggcgtctccgactggttcacg
ctgcaggcgcacgcggaaggcggccagggcctctccaacggcggcgcgggggcgatcgtc
ggcatcggcaatgcgggcgtgatcagcacggctgcggcgggaagcaggctgcgcggcatg
acgggggcgctcttgagcgtcggctatcagtacatcgggccgaagttctcgctcacggct
caggcgacgcgcgcgaccgacggctatcgcgatatcggcgcgttgtcgggcacgtcgctc
ttcgaacacatttaccagtccacggcgtccgtcgcgctcgggcgcgggcagtcggcgagc
ctcagctatatcgattcgctcgacagctttgcgggccacgcgcgcgtcgtgacgctcgcg
tacaacgcgcagctcggccggcgctggtcgctgttcgccaccgcgtatcgcgatttcctg
cagcgcgacgtatggggcggctcgatcggcgtgacgatcgcgctcggcggcaatacatcg
gtcgcgacgacgctcgcgcaaaacggcgggcacatgacggcggacgtcaccgcgtcgcgc
ccggcggatttcagcggcggctggggctggtccgtgcagggcggcgcgggcgcggattac
cggcatgcgttcgcgggcgcgaactaccgggcgagcttcggcgactttcaggcgaccgcg
cagcgcttcaatggcgtgacgacggcgaccgccgaagccgcgggcgcactcgtcgtgatg
gacggcacggtgctgccgtcgcgcacgctgaccgacggcttcgcgctcgtttcgaccgac
ggcatcgccagggtgccggtcctgcaggaaaaccgcctcgtcggcgcgacgaaccggcgc
ggctatctgctcgtgcccgatctgacgtcgtatcagcgcaatcagatcgcgatcgatccg
cttgcgctgcccgccgacgtgcggatcgagcgcacggggctggacattgcgccggagcgt
cgttcgggcgcgctggcgcacttcggcatggagcgctaccggggcgcgtcggtgagtttc
gtcgatgcaaacggacgcgcgctgccccccggcgcgacggcgacaacggcgagtggcgcg
gcagcgacggtaggctacgacggcatcgcattcttcgacaagctcgacgcgagcaacacg
gtgacgatccgcggcaaggatctcgactgcacggctcacgtcgcgtatgaaacgcccgcg
gccggcacgctcgcgcaactcgggccggtgccgtgtatcgcgaaccggagcgacgggagg
tga
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