KEGG   Burkholderia sp. YI23: BYI23_D012220
Entry
BYI23_D012220     CDS       T01711                                 
Symbol
hofQ
Name
(GenBank) Type II secretory pathway component HofQ
  KO
K02453  general secretion pathway protein D
Organism
byi  Burkholderia sp. YI23
Pathway
byi03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:byi00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    BYI23_D012220 (hofQ)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:byi02044]
    BYI23_D012220 (hofQ)
Secretion system [BR:byi02044]
 Type II secretion system
  General secretion pathway protein
   BYI23_D012220 (hofQ)
SSDB
Motif
Pfam: Secretin Secretin_N STN TPR_4 KH_DEAH11 TPR_16 TPR_2 type_II_gspD_N0 HemY_N
Other DBs
NCBI-ProteinID: AET94732
LinkDB
Position
byi_1p:complement(1388224..1390179)
AA seq 651 aa
MSRLKKITVLTLLSLLTACASEMHRKGLENTLSNMAPDAQLDLLAQQTAQYPDDLEIRSW
YLSLRRRLEVDYLNRATVAYRAGDSAQALAWARKAQDAAPGDDAARSMIEWIEKQAPIDT
AVQYASTIYLDQPQEALGILNDVLAKQPGNARAARLRDSIVTPKGQDLAPKLDKDLDQPI
TVQFRDQPLISIFELVSNITGLNFTFDRDVQATAPTTIFASNTPVKQVLSMVLQANQLAS
KVVNGNAVLIYPKRPDKETEYRDLVVRTFYLENAQAAQVLASLKQMVKTRDAVLDERTNA
IIMRDSADTVKVAERIIKALDVSPAEVVIDAQILEVTSSDLLNLGINWPNGANFALQPVP
DDPNTTPREAGTLTLAQLRSLNSGDVLVRVGPLGINFLQSQGKTKTLANPSIRVRNREKA
KVLIGDRLPVVTTTLSSNFSSESINYQDVGLTLEVAPVIAGNDEVQVKLHMEVSNVTDTI
TTSTGLVAYQIGTRSADTVMSVRNNETQMLAGLLQRNERSAGSGWPGLSRVPVFDRIFGT
RADDQHQTELVLLLTPRIVRNQATPAGNVMQFNSGTETRISTDRNVISTNESVRMTPSLP
PPAPVPPAAPAAPSLPPPAPPPVPAPPPAAFLLPVAPQQPPGGETPPFTQP
NT seq 1956 nt   +upstreamnt  +downstreamnt
atgagccggctcaagaagatcacggtcctgaccttgctgtcgctcctcacggcatgcgcg
agcgagatgcatcgcaaggggctggaaaacacgctgtcgaacatggcgcccgacgcgcag
ctcgatctgctcgcgcagcagaccgcgcaatatcccgacgatctcgagattcgaagctgg
tatctgagcttgcggcggcggctggaagtcgactatctgaatcgcgcgacggtcgcgtat
cgcgcgggcgattccgcgcaggcgctcgcgtgggcgcgcaaggcgcaggacgccgcgccc
ggcgacgacgccgcgcgcagcatgatcgagtggatcgagaagcaggcgccgatcgatacc
gccgtgcagtacgccagcacgatctatctggatcagccgcaggaagcgctcggcattctc
aacgacgtgctcgcgaaacagcccggcaacgcccgcgccgcgcgcctgcgcgattcgatc
gtcacgccgaagggacaggatctcgcgccgaagctggacaaggatctcgatcagccgatc
accgtgcagttccgcgatcagccgctcatcagcattttcgagctcgtgtcgaacatcacg
ggcctgaacttcacgttcgaccgcgacgtgcaggccaccgcgccgacgaccatcttcgcg
agcaacacgccggtgaagcaggtgctctcgatggtcctgcaggccaatcagctcgcgagc
aaggtcgtgaacggcaacgccgtgctcatctatccgaaacgcccggacaaggaaaccgaa
tacagggatctcgtggtgcgcacgttctatctcgagaacgcgcaggccgcgcaggtgctc
gcctcgctcaagcagatggtcaagacgcgcgacgccgtgctcgacgagcgcaccaacgcg
atcatcatgcgcgactcggccgataccgtgaaagtggccgaacgcatcatcaaggcgctg
gacgtgtcgccagcggaagtcgtcatcgatgcgcagattctcgaagtgacgtcgtcggac
ctgctgaacctgggcatcaactggccgaacggcgcgaacttcgcgctgcagccggtgccg
gacgatccgaacaccacgccacgagaagccggcacgctcacgcttgcgcaattgcgcagc
ctgaacagcggcgacgtgctcgtgcgcgtcgggccgctcggcatcaatttcctgcaaagc
cagggcaagacgaagacgcttgcgaatccgagcatccgcgtgcgcaaccgcgaaaaggcg
aaggtgctgatcggcgaccggctgcccgtcgtcacgacgacgctgtccagcaacttcagt
tcggaaagcatcaactatcaggatgtcgggctgacgctcgaagtcgcgcccgtgatcgcc
ggcaacgacgaagtgcaggtgaagctgcacatggaagtgtcgaacgtgacggacacgatc
acgacctcgacgggactcgtcgcgtatcagatcggcacacgctccgccgacaccgtgatg
agcgtgcgcaacaacgaaacgcagatgctcgcgggcctgctacagcgcaacgagcgctcg
gcgggcagcggctggccaggcctgagccgcgttccggtgttcgaccgcattttcggcacg
cgcgccgacgaccagcatcagaccgagctcgtgctgctgctgacgccgcgcatcgtgcgc
aatcaggcgacgcccgcgggcaacgtgatgcagttcaactccggcacggaaacgcgcatc
tcgacggatcgcaatgtcatttcgacgaacgagagcgtgcgcatgacgccgtcattgccg
ccgcccgcgccggtcccgcctgccgcccccgccgcgccttcgctgccgccgcccgcgcct
ccgcccgtcccggcgccgccgcccgcggcgttcctgctgccggtcgcgccgcagcaaccg
cccggcggcgaaacgccgccgttcacccagccctga

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