Blautia pseudococcoides: A4V09_03340
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Entry
A4V09_03340 CDS
T04458
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
byl
Blautia pseudococcoides
Pathway
byl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
byl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A4V09_03340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
byl03019
]
A4V09_03340
03009 Ribosome biogenesis [BR:
byl03009
]
A4V09_03340
Enzymes [BR:
byl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A4V09_03340
Messenger RNA biogenesis [BR:
byl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A4V09_03340
Ribosome biogenesis [BR:
byl03009
]
Prokaryotic type
rRNA helicases
A4V09_03340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
CMS1
AAA_30
AAA_19
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ANU78530
UniProt:
A0A1C7IFR3
LinkDB
All DBs
Position
complement(736375..737964)
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AA seq
529 aa
AA seq
DB search
METMKFEELGLFPEIEKAVSYMGFEEASPIQAKAIPAMISGRDIIGQAQTGTGKTAAFGI
PLLQKIDIKDKKLQAIVLCPTRELAIQVADEIRNLAKYLHGIKVLPIYGGQDIVKQIRSL
KSGTQLIIGTPGRVMDHMRRKTLKMDDVHTVVLDEADEMLNMGFREDIETILSGVPEERQ
TVLFSATMPKPILEITKKFQKDAEVIKVTKKELTVPNIEQFYYDVKPKNKEEVLSRLLDL
YSPRLSVVFCNTKKQVDLLVNALIGRGYFAAGLHGDMKQAQRDRVMQSFRKGRTDILVAT
DVAARGIDVDDIEAVFNYDLPQDDEYYVHRIGRTGRAGRGGRAFTFASGKELYKLKEIQR
YCKTKIYAQKVPSLNDVANTKMENILENVDSVIERENLSLMIDAIDEKVNNSDYTTLDLA
AALLKMYMGMVQEEPDEEVVDFGDTGAEEPGMVRLFINIGKKQRVRPGDILGAIAGESGM
PGKLIGSIDMFDKYTFVEVPREYAKDVLNAMKTAKIKGNTIAIEPANQR
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaatgaaatttgaagaattgggattatttcctgaaattgaaaaagcagtgagt
tacatgggatttgaggaggcctcccccattcaggccaaagcaattcctgctatgataagc
ggtcgtgacattatcggccaggcacagaccggaacaggaaaaaccgcagcttttggtatc
cctcttttgcagaagatagatattaaggacaaaaaacttcaggccattgtactctgcccc
acaagagagctggccatacaggtagcggacgaaatccgtaacctggcaaaatacctgcac
ggcatcaaggtgctccccatctatggcggtcaggatattgtaaaacagattcgttcccta
aaaagtggaacacagttgatcatcggcacaccgggccgtgtcatggaccatatgcgcaga
aaaaccctgaaaatggatgacgtacacacagttgttctggatgaggcggacgaaatgctc
aacatgggattccgtgaagatattgaaactattttaagcggtgttccagaggaacgtcag
actgttctcttctcagccaccatgccgaagcctattctggagatcaccaaaaagttccaa
aaagacgcggaagtcatcaaggtgacaaaaaaagaactgaccgttcccaatattgaacag
ttctactatgacgtaaaacctaagaataaagaggaagtgctctcccgtcttctggacctc
tactccccaaggctctccgtagtgttctgcaacaccaaaaaacaggtggatcttctggtc
aatgccctgatcggcagaggttattttgccgcaggcctgcacggagatatgaagcaggca
cagcgtgaccgggtgatgcagagcttccgaaaaggaaggactgacattctggttgccaca
gatgtggctgcccgcggcattgatgtggatgacattgaggcagtatttaactacgacctt
ccccaggatgacgagtattatgtacatcgtatcgggcgtacgggacgtgcaggaagaggc
ggccgtgccttcacatttgccagcggaaaggaactttacaaattaaaagagatccagcgc
tactgcaagactaaaatctatgcccagaaagtgccttctttaaatgatgtggccaacacc
aagatggaaaacattttggaaaacgtggattctgtcattgaaagagaaaacctttccctt
atgatcgacgctattgatgaaaaagtcaacaattctgactacaccaccttagacctggct
gctgccctgcttaaaatgtatatgggtatggttcaggaggagccggatgaggaagtggtt
gatttcggtgacactggtgcggaggagcccggaatggtacgtctcttcatcaacatcggt
aaaaaacagcgtgtccgccccggtgacatcctgggcgccattgccggtgaaagcggaatg
ccaggaaagcttatcggaagcattgacatgttcgataaatacacctttgtagaagttccg
agagaatacgcaaaagacgtacttaatgccatgaagaccgctaagatcaaaggcaacacc
atagccattgagcctgccaatcagaggtag
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