Blautia pseudococcoides: A4V09_15035
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Entry
A4V09_15035 CDS
T04458
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
byl
Blautia pseudococcoides
Pathway
byl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
byl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A4V09_15035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
byl03019
]
A4V09_15035
Messenger RNA biogenesis [BR:
byl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
A4V09_15035
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B_6
SIS_2
Lectin_like
Motif
Other DBs
NCBI-ProteinID:
ANU76958
UniProt:
A0A1C7ID70
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Position
complement(3196611..3198278)
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AA seq
555 aa
AA seq
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MKKNNNSKLKIIPLGGLEQIGMNITAFEYEDSIVVVDCGLSFPEDDMLGIDLVIPDITYL
KDNIDKVKGFVITHGHEDHIGALPYVMKEINIPIYATKLTIGLIENKFKEHNLLRSTKRK
VIKHGQSINLGCFRIEFIKTNHSIQDASALAIYSPAGIVVHTGDFKVDYTPVFGDAIDLQ
RFAEIGKKGVLALMCDSTNAERKGFTMSERTVGKTFDNIFAEHKNTRIIIATFASNVDRV
QQIINSAYKYGRKVAVEGRSMVNVIGTASELGYLKIPDKTLIEIDQLRNYPDEKVTLITT
GSQGESMAALSRMAASIHKKVTIKPNDTIIFSSNPIPGNEKAVSKVINELSMKGADVIFQ
DAHVSGHACQEEIKLIYSLVKPKYAIPVHGEYRHLKAQAGLALDLGIPKENVFILQSGDV
LELNEEEPAKVTGKVRTGAILVDGLGVGDVGNIVLRDRQHLAEDGIMIVVLTLEKRSSRL
LAGPDIVSRGFVYVRESEDLMDEARIVVEDAIDVCLDKHITDWGKIKNVIKDSLGEFLWK
RTKRNPMILPIIMEA
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaaaaacaacaactcaaaattgaagatcattcctttgggcgggttggaacagata
ggaatgaatattactgcctttgaatatgaggacagtattgtcgtagtggactgcggtctg
tcatttcccgaggacgatatgctgggaattgaccttgtgataccggacatcacttatctg
aaggacaatattgacaaagtcaaaggattcgttatcacccatggccacgaggaccatatc
ggtgcacttccttatgtaatgaaggagatcaatatacccatctatgcaacaaagcttacg
atcggattaatcgaaaataaatttaaagagcacaatttgctcagaagtaccaagagaaaa
gtgatcaaacatggacagtccattaatctgggctgctttcgtatagaatttatcaagaca
aaccacagcatccaggatgcgtccgcactggcgatctattccccagcgggaatcgtggtg
cataccggtgactttaaagtggactacacgcctgtattcggagatgccattgacctgcag
cggtttgcggaaatcggaaagaaaggtgtactggcactgatgtgcgacagtaccaatgcg
gagcgcaagggatttaccatgtctgagcgcacggttggaaagacctttgacaatatattt
gcggaacataagaacaccaggatcattatcgcaacctttgcctccaatgtggacagggtg
cagcagatcatcaattctgcctacaaatacggcaggaaggtggctgtggagggccggagc
atggtaaacgttatcggcacggcctctgagctggggtatctgaagatcccggacaagacg
ctgatcgagattgaccagcttcggaattacccggatgagaaggttacgctgatcaccacg
ggaagccagggcgaatccatggcagccctctccagaatggcagccagtattcataaaaaa
gtgaccatcaaaccaaatgatacgatcattttcagttccaatcccattccgggcaatgaa
aaggcagtatccaaggttatcaatgaactgagcatgaaaggtgcggatgttatcttccag
gatgcccacgtatccggacatgcctgccaggaagagatcaaactgatctattccctggta
aaaccaaaatatgccattccggtgcacggtgaataccgtcatctgaaagcccaggcagga
cttgccctggatttgggaatccccaaggaaaatgtgtttatcctgcagtccggcgacgtg
ctggagctgaatgaggaggagccagccaaagttacaggcaaagtgcgcacaggcgctatc
ctggttgacggacttggcgtgggtgatgtgggaaatatcgtgctgcgtgaccgccagcat
ctggcagaggatggtatcatgatcgtggtgctgactctggagaagcgttccagccgtctt
ctggcaggaccggatattgtctcacggggatttgtgtacgtgagggaatccgaagatttg
atggatgaggccagaatcgtggtggaggacgccatagatgtgtgcctggataagcatata
acagactggggcaaaataaagaatgtcatcaaggactccctgggtgaattcttatggaag
agaactaagagaaaccccatgatcctgccgattatcatggaggcttag
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