Blautia pseudococcoides: A4V09_17850
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Entry
A4V09_17850 CDS
T04458
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
byl
Blautia pseudococcoides
Pathway
byl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
byl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A4V09_17850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
byl03021
]
A4V09_17850
03400 DNA repair and recombination proteins [BR:
byl03400
]
A4V09_17850
Enzymes [BR:
byl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A4V09_17850
Transcription machinery [BR:
byl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A4V09_17850
DNA repair and recombination proteins [BR:
byl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A4V09_17850
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
HEAT_LCD1
Motif
Other DBs
NCBI-ProteinID:
ANU77443
UniProt:
A0A1C7IF17
LinkDB
All DBs
Position
complement(3848215..3852057)
Genome browser
AA seq
1280 aa
AA seq
DB search
MEKNRIRPITTGKSMRMTYQRQKEVLEMPNLIEVQKDSYQWFLDEGLKEVFEDISPIADY
SGKLSLEFVDFTLCEDEVKYSIEECKERDATFAAPLKVRVKLYNRENDEISEHEIFMGDL
PLMTATGTFVINGAERVIVSQLVRSPGIYYSIAHDKLGKTLYSCTVIPNRGAWLEYETDS
NDVFYVRVDRTRKVPITVLIRALGIGTNAEIIELFGEEPKILASFTKDTAESYQEGLLEL
YKKIRPGEPLAVESAESLITSMFFDPRRYDLAKVGRYKFNKKLLLRNRIAGHILAEEVVD
TTTGEIMAEAGTVVTKELADQIQNAAVPYVWIQGEERNIKVLSSMMVDITNYVDADPAEM
GVTELVYYPVLAKILEENEDIEDIKDAVHREIHELIPKHITKEDILASINYNMHLEYGLG
NDDDIDHLGNRRIRAVGELLQNQYRIGLSRLERVVRERMTTQDMEGISPQSLINIKPVTA
AVKEFFGSSQLSQFMDQNNPLGELTHKRRLSALGPGGLSRDRAGFEVRDVHYSHYGRMCP
IETPEGPNIGLINSLASYARINQYGFVEAPYRKIDKSDPKNPRVTDEVVYMTADEEDNYH
VAQANEPLDEEGHFIHKNVSGRYLDETQEYERHMFDYMDVSPKMVFSVATALIPFLQNDD
ANRALMGSNMQRQAVPLLTTEAPVVGTGMEVKAAVDSGVCVVAKKAGTIECAASKEIVMR
NDDGTKDTYRLTKFMRSNQSNCYNQRPIVTKGEHVEAGQVIADGPSTSNGELALGKNPLI
GFMTWEGYNYEDAVLLSERLVQDDVYTSVHIEEYEAEARDTKLGPEEITRDVPGVGDDAL
KDLDERGIIRIGAEVRAGDILVGKVTPKGETELTAEERLLRAIFGEKAREVRDTSLKVPH
GEYGIVVDAKVFTRENGDELSPGVNQAVRIYIAQKRKISVGDKMAGRHGNKGVVSRVLPV
EDMPFLPNGRALDIVLNPLGVPSRMNIGQVLEIHLSLAAKALGFNIATPVFDGANENDIQ
DTLDLANDYVNMEWEDFEAKHKDTVRPEVLQFLYDNRAHRELWKGVPISRDGKVRLRDGR
TGEYFDSPVTIGHMHYLKLHHLVDDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVW
ALEAYGASYTLQEILTVKSDDVIGRVKTYEAIIKGDNIPEPGIPESFKVLLKELQSLGLD
VRVLREDMTEVEIMENIDYGETDMRSIIEGDSKHRGEEEYGDYGFSKQEFEGEELVDVED
EPEEDEEAFLSLDDDTLVEE
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaaatagaatccgtcccattacaaccggtaagagcatgagaatgacctaccag
cgccagaaagaggtactggaaatgccgaacctcattgaagtacagaaagactcttaccag
tggtttctggacgaaggtcttaaagaagtttttgaagatatctctccaatcgccgattac
agcggtaaattaagcttggaatttgttgactttactttgtgtgaagatgaggtaaaatac
tccatcgaggaatgcaaggagagggatgctacttttgcagctcctttgaaagtaagggta
aaattatacaacagagagaatgacgaaatcagtgaacatgaaatcttcatgggtgatctg
ccgttaatgacagcaaccggtaccttcgtgatcaacggcgctgaacgagttattgtcagc
cagcttgtacgttctccggggatttattactctatcgctcatgataaactgggcaaaacc
ctttattcctgtaccgttatcccgaacaggggtgcctggctggaatatgagaccgactcc
aatgacgtattctatgtacgtgtagacagaaccagaaaagtccctattacagttttgatc
cgtgccttaggtattggcacgaatgcagaaattatagagttattcggtgaggaaccgaag
atattagccagctttacaaaagacactgctgagagttatcaggaaggtcttctggagtta
tacaaaaaaatccgtccgggtgagccgctggctgtggagagcgcagagagcctgatcacc
agtatgttctttgacccaagacgttacgacctggcaaaagtaggccgttacaaattcaac
aaaaagctgctgctgagaaaccgtatcgcaggccatatactggctgaggaggttgtggat
accacaacaggtgagatcatggcggaggccggcacagttgtaacaaaagaactggctgat
cagatccagaatgcggcagttccttatgtatggatccagggcgaagagcgtaacatcaaa
gtcctttcaagcatgatggtggatatcaccaattatgtggacgcagatccggctgagatg
ggagtgaccgaactggtctactatcctgtcctggctaagatactggaagaaaatgaggat
attgaagatatcaaggatgcagtccatcgtgagatccacgagctgattccgaagcatatc
acaaaagaagatatccttgcttccattaactataacatgcatctggaatacggtctggga
aatgatgacgatatcgaccatctgggcaacagacgtatccgtgcagtaggtgaactgctg
cagaaccagtacaggatcggtctttccagactggagagagtggttcgtgaaagaatgaca
acacaggatatggagggtatttctccccagtccctgatcaatatcaaaccggttacagca
gccgtgaaggaattcttcgggtcctcccagctgtcacagttcatggatcagaacaaccct
ctgggtgagctgacccataagagacgtctatccgcacttggccccggcggtctgtcacga
gaccgtgcaggcttcgaggttcgagatgtacattactcccattacggaagaatgtgccct
atcgagacccctgagggacctaacatcggtctgatcaactccctggcatcctatgccagg
atcaaccagtacggctttgtggaagcaccgtaccgtaagattgacaaatcagatcccaag
aatccgcgggttacagatgaagtggtctatatgaccgcagatgaagaagataattaccat
gttgcgcaggccaatgagccgctggacgaggaagggcactttatccataagaacgtttcc
ggacgttatctggatgaaacacaggaatatgaacgtcatatgtttgactacatggacgta
tctcccaagatggtgttctctgtggctacagccctgatccccttcctgcagaacgatgat
gcaaaccgtgcgctgatgggatccaacatgcagcgccaggccgttccgcttctcaccaca
gaggctcctgttgtaggaaccggtatggaagtgaaggctgccgttgactccggtgtctgt
gtagtggcgaaaaaagccggcaccatagagtgcgcagcgtcaaaagagatcgttatgcgc
aatgatgacggtacaaaagacacttaccgccttaccaagttcatgagaagtaaccagagc
aactgctacaaccagaggcccatcgtgaccaaaggggagcatgtagaagcaggacaggtg
atcgctgacggtccgtccacctccaatggtgagctggctcttggcaagaaccccctgatc
ggtttcatgacctgggagggttacaattacgaggatgccgtcctgttaagcgaaaggctg
gtacaggatgatgtctatacttctgtgcatattgaagagtatgaggcagaagccagagat
acaaagttaggaccggaagagatcacacgtgatgtaccgggtgtaggtgatgatgcctta
aaagacctggacgagcgtgggatcatccgtatcggtgccgaggtccgcgcaggcgatatc
ctggtcggtaaagtgactcctaagggagagacagagctgactgcggaggagaggctgctc
cgtgctattttcggtgagaaggcccgtgaagtgcgtgacacttccctgaaggttcctcac
ggtgagtacggtattgttgtggatgcaaaagtatttacaagagagaacggcgatgagctg
tcccccggtgtgaatcaggcagtccgtatctatattgcacagaagagaaaaatctctgtg
ggtgacaagatggccggccgtcacggtaacaagggtgttgtgtcccgtgtacttcctgtg
gaggatatgccattccttcccaacggacgtgcgctggacatcgtactgaaccctctgggt
gtgccttcccgtatgaatatcgggcaggtgctggagatccatctgagtcttgcggcaaaa
gcccttggattcaacattgccacaccggtatttgacggtgccaacgagaatgatatccag
gatactctggatcttgcaaatgattatgtgaacatggaatgggaagactttgaggcaaag
cataaagatacggtgcgcccggaggttttacagttcctttatgataacagagcccacagg
gagctgtggaaaggcgtgccgatctcccgtgacggtaaagtaagactccgtgacggacgt
acaggtgaatattttgacagtcctgtaaccatcggacacatgcactacctgaagctgcat
cacctggtagatgataagatccacgcgcgttccacaggcccatactccctggtaacacag
cagcctctgggtggtaaagcccagttcggcggccagcgtttcggagagatggaggtttgg
gcactggaggcttatggtgcttcctacacactgcaggagatcctgacagtgaaatccgat
gatgtgatcggacgtgtgaaaacttatgaagcgattatcaagggcgacaatattccggag
cctggtattccggagtccttcaaggtacttttgaaggagctgcagtccttgggtctggat
gtcagagtcctcagagaagacatgacagaagtggagatcatggagaatatcgactatggc
gagacagatatgcgctccatcattgaaggtgattccaaacaccgcggcgaggaagaatac
ggtgactacggattctccaaacaggaattcgagggtgaagaattagtagacgtggaggat
gagccggaagaggatgaagaagcattcttgagcttagatgatgatactcttgtcgaggag
taa
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