Borreliella yangtzensis: QIA34_02470
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Entry
QIA34_02470 CDS
T09301
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
byn
Borreliella yangtzensis
Pathway
byn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
byn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QIA34_02470 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
byn03021
]
QIA34_02470 (rpoB)
03400 DNA repair and recombination proteins [BR:
byn03400
]
QIA34_02470 (rpoB)
Enzymes [BR:
byn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QIA34_02470 (rpoB)
Transcription machinery [BR:
byn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QIA34_02470 (rpoB)
DNA repair and recombination proteins [BR:
byn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QIA34_02470 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
Peptidase_M23
RALF
Motif
Other DBs
NCBI-ProteinID:
WKC74277
LinkDB
All DBs
Position
complement(400740..404207)
Genome browser
AA seq
1155 aa
AA seq
DB search
MIKRVHLGQGRAEEILDLPNLIEIQLNSYEKFLQLDKLKNKKPLLNEGLESVFRNIFPIK
SGNGDVALEYERYYIEYDALDFTEKECKRKGQSYEAVLKVRLNLQFLATGEIRQKDVYMG
TIPLMTERGTFIINGAERVVVSQIHRSPGVVFYKEKDLYSARIIPYRGSWLEFEIDSKKD
YLYVKIDRKKRILITLFLRALGFDTREKIIETFYNIKKIKVKDDTKRDLPGQYLAKSVDI
KENMHYRAGDKITLQDVEDFLQNGVNEIELVDFDGYNDVFGKYFVSSNVILNCLEKEDAF
FALKDSSKELPKESVMLAVYGALFPGEPISIDNAENDLKTIFFSERRYDLGRVGRYKLSK
KFGFDDLNTSVLTMNDIVNTISHLLRIYEGHDILDDIDHLGNRRVRSVGELLTNIYKGAM
SRVEKIAKDRMSNKEVFNLKPQELISVKPIVSAVKEFFATSQLSQFMDQVNPLAELTHKR
RLNALGPGGLSRDRAGFEVRDVHYTHYGRMCPIETPEGPNIGLIVSLATYSRVNDYGFLE
TPYRKVVNGEVTDELEYLSAIDEEKKCIAQANAAFDSNGNYLEDLVSVRISGDYTTTNPK
NIDYMDVSPRQLISVSSALIPFLEHNDANRALMGSNMQRQAVPLLFPKPPIVGTGMESVV
AKDSGVVIKAKRSGEVILATSNKIVIKPFESENAKDLDEYQIVKYERTNQDTCFNQSVLV
KEGQKVEKDEIIADGPATRYGELALGNNLLLGVIPWNGFNYEDAILISDRIVKEDLYTSI
HIKEFSIEVRETKLGPEKVTGDIPNVSEKILNKLDENGIIRIGTYVKPGDILVGKVTPKS
EGDITPEFRLLTSIFGEKAKDVKNNSLKVPHGTEGTVIDVQRITKEDVSNLSPGVEEILK
VYVAKKRKLKEGDKMAGRHGNKGVVAKILPVEDMPYLADGTPLDICLNPLGVPSRMNIGQ
LMESQLGLAGKYLKESYNVPVFESATNEQIQEKLKKAGFNPTSKEILYDGYTGEPFENEV
MVGVIYMLKLHHLVDDKMHARSTGPYSLVSQQPLGGKAQFGGQRLGEMEVWALEAYGAAH
TLQELLTVKSDDMSGRVKIYENIVKGIPTNVSGIPESFNVLMQELRGLGLDLSIYDDNGN
QVPLTEKEEELINKS
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaagagttcatctgggacaaggaagagctgaggagattttagacttacctaac
ctgatagaaatacaattaaattcttatgaaaaatttttacaacttgataaattaaaaaat
aaaaaacctttacttaatgaaggcctcgagtctgtttttagaaatatatttcccatcaag
agtggaaatggtgatgttgctcttgagtatgaaagatactatatagaatatgatgctctt
gattttacagaaaaagaatgtaaaagaaagggacaaagttatgaagctgttttaaaagta
agactaaatttgcaatttttagctactggggaaataagacaaaaagatgtatacatggga
actattcctttaatgacagaaaggggtacttttattattaatggggctgagagagttgtt
gtttctcagattcatagatctccaggagttgttttttataaagaaaaagatttatattct
gctagaataattccttatcgtggttcttggttagaatttgagattgattctaaaaaagat
tatctttatgtaaagatagatagaaaaaaaagaatacttataaccctttttttgagagct
ttggggtttgatacgagagaaaaaataatagaaactttctacaatattaaaaaaattaaa
gttaaagatgacacaaaaagagatcttccaggtcaatatttagccaagagtgttgacata
aaagagaatatgcattatagagcaggagataagattactctacaagatgttgaagatttt
ttacaaaatggggtaaatgaaatagaacttgttgattttgatggttataatgatgttttt
ggaaagtattttgtgagttcaaatgttattttaaattgtcttgagaaagaggatgctttt
tttgctttaaaggatagttctaaagagcttccaaaagaatcggttatgctcgctgtttat
ggcgcactttttcctggtgagccaatatctattgataatgctgaaaacgatttaaaaact
atatttttttctgaaagaagatatgatcttggacgcgtgggacgatataagctttctaaa
aaatttggatttgatgacttgaatacatcggttttgactatgaatgatattgttaatacc
atatctcatcttttgagaatatatgaaggccatgatattcttgatgatattgatcatctg
ggaaataggagggtgcgttctgttggggagcttcttactaatatatataaaggggcaatg
tcaagagttgaaaaaatcgctaaagatagaatgtctaacaaggaagtttttaatctcaaa
ccccaggaactaataagtgttaaacctattgtatctgctgttaaagaattttttgcaacc
agccagctttcgcagttcatggatcaggtcaatcctttggccgaacttactcataaaagg
cgccttaatgctcttggaccagggggactttcaagagatagagcaggatttgaagtaaga
gacgtccattatactcattatggcaggatgtgccctattgaaactcctgaagggccaaat
atcggacttattgtttctttagctacttattctagagttaatgattatggttttttagaa
accccttataggaaggttgttaatggagaggtaactgacgaattagaatatttatctgct
attgatgaagaaaaaaagtgtattgcccaggctaatgctgcttttgattctaatggaaat
tatcttgaagatttggtttctgttagaatttctggtgattataccacaacaaatcctaaa
aatatagactatatggatgtctctcctaggcagttaatttcagtatcttctgcattaatt
ccttttcttgagcacaatgatgcaaatagagcgcttatgggttctaatatgcaaagacaa
gcagtacctctgctttttcccaagcctccgattgttggtacaggtatggaaagtgttgtt
gcaaaggattctggagtggtaattaaggctaaaagaagtggagaagttattcttgcaaca
agcaataaaatcgttattaaaccttttgaatcggagaatgctaaagatttagatgaatat
cagattgttaagtatgaaagaacaaatcaagatacttgctttaatcaatccgttttggtt
aaagagggtcaaaaggttgaaaaggatgaaataatagctgatggtcctgctactagatat
ggagagcttgctcttggtaataatttattgctgggagttattccttggaatggatttaat
tatgaagatgctatattaatttctgacagaattgtaaaggaagatctttatacatctatt
catattaaagaattcagtatagaagtaagagaaactaaacttggtcctgagaaagtcaca
ggagatataccaaatgttagcgaaaagatattaaataaattagatgaaaatggaattata
cggataggaacttatgtaaagcctggcgatattctggtcggcaaagttactccaaagtca
gaaggagacattactcccgaatttagacttttaacttctatttttggagaaaaagcaaaa
gatgttaaaaataattcattaaaagttcctcatggtaccgaaggtacagttattgatgtt
caaagaattactaaagaggatgttagtaatctttctcctggagttgaagagatccttaaa
gtttatgttgctaaaaaaaggaagcttaaagagggtgataaaatggctggtcgacatggc
aataagggggttgttgcaaaaatccttcctgttgaagatatgccatatctggcggatgga
actcctcttgatatatgcttaaatcctttaggagtgccttctagaatgaatatcgggcag
ttaatggaatcacaattaggtcttgctggtaaatatcttaaagaatcttataatgttcct
gtttttgaatcggctacaaatgaacaaattcaagaaaaattaaaaaaagctggatttaat
ccaacttctaaagagattttatatgatggctatacaggagagcctttcgaaaatgaagta
atggttggggtaatttacatgcttaaattgcaccaccttgttgatgataaaatgcatgca
agatcaacagggccatattctcttgtttctcaacaacctcttggaggaaaggctcaattt
ggtgggcaaagacttggagaaatggaggtttgggctcttgaagcttatggtgcggctcac
acccttcaagaacttttaacagtaaaatctgatgatatgtcaggtagagtcaaaatatat
gaaaatatagtaaaaggcattcctactaatgtatcagggattcccgagtcttttaatgtg
ctaatgcaagagcttagaggacttggacttgatttgtcaatttatgatgataatggaaat
caggttcctttgacggaaaaagaagaagaattgattaataaaagctaa
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