KEGG   Bradyrhizobium yuanmingense: N2605_02950
Entry
N2605_02950       CDS       T11816                                 
Symbol
serA
Name
(GenBank) phosphoglycerate dehydrogenase
  KO
K00058  D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
Organism
byu  Bradyrhizobium yuanmingense
Pathway
byu00260  Glycine, serine and threonine metabolism
byu00270  Cysteine and methionine metabolism
byu00680  Methane metabolism
byu01100  Metabolic pathways
byu01110  Biosynthesis of secondary metabolites
byu01120  Microbial metabolism in diverse environments
byu01200  Carbon metabolism
byu01230  Biosynthesis of amino acids
Module
byu_M00020  Serine biosynthesis, glycerate-3P => serine
Brite
KEGG Orthology (KO) [BR:byu00001]
 09100 Metabolism
  09102 Energy metabolism
   00680 Methane metabolism
    N2605_02950 (serA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    N2605_02950 (serA)
   00270 Cysteine and methionine metabolism
    N2605_02950 (serA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:byu04147]
    N2605_02950 (serA)
Enzymes [BR:byu01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.95  phosphoglycerate dehydrogenase
     N2605_02950 (serA)
    1.1.1.399  2-oxoglutarate reductase
     N2605_02950 (serA)
Exosome [BR:byu04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   N2605_02950 (serA)
SSDB
Motif
Pfam: 2-Hacid_dh_C PGDH_inter 2-Hacid_dh ACT AdoHcyase_NAD KARI_N MtrF-like_dom-III NAD_binding_2 NAD_binding_7 ACT_AHAS_ss Hpr_kinase_C UPF0020
Other DBs
NCBI-ProteinID: UWU85435
LinkDB
Position
607437..609026
AA seq 529 aa
MTKPKVLISDALSPAAVQIFRDRGVEVDFQPNLGKDKDKLAEIIGNYDGLAIRSATKATA
KILEKAARLKVIGRAGIGVDNVEIPAATAKGIIVMNTPFGNSITTAEHAITLMLALAREI
PQADASTQAGKWEKNRFMGVEITGKVLGVVGCGNIGSIVADRALGLRMKVIAFDPFLSPE
RAKDIGVEKVDLDDLLRRADFITLHTPLTEKTKNIIDAAAIAKMKKGVRLINCARGGLVD
EQAVVDALNAKHIAGAAFDVFVEEPATKSVLFGHPNVICTPHLGASTTEAQENVALQVAE
QMSDYLLTGAISNAVNFPSITAEEAPKLKPFIALAEKLGSFAGQLTESGILKVEITYEGH
VAEMKIKAITSAVLSGLLRPMLGEVNVVSAPVVAKERGMVVDEIVRAAQSDYESLITVTV
TTERQERSVSGTVYADGKPRLVDIKGIRVDAEFGKSMIYVTNEDKPGFIGKFAGLLGDAK
INIATFHLGRVAPGSDAIALVEVDGVVPADVLAKVQALPQVKQAKALTF
NT seq 1590 nt   +upstreamnt  +downstreamnt
atgaccaaacccaaagttctcatttccgacgcgctctcgcccgctgccgtgcagatcttc
agggatcgcggcgtcgaggtcgacttccagcccaatctcggcaaggacaaggacaagctg
gccgagatcatcggcaattacgacggccttgcgatccgctccgcgaccaaggcgaccgcc
aagatcctcgagaaggcggccaggctgaaggtgatcggccgcgccggcatcggcgtcgac
aatgtcgagatcccggccgcgacggccaagggcatcatcgtgatgaacacaccgttcggc
aattcgatcacgaccgccgagcacgccatcaccctgatgctcgcgctcgcccgcgagatc
ccgcaggccgatgcctcgacgcaggccggcaagtgggagaagaaccgcttcatgggcgtg
gagatcaccggcaaggtgctgggcgtcgtcggctgcggcaatatcggctcgatcgtcgcc
gaccgcgcgctcggcctgcgcatgaaggtgatcgcgttcgacccgttcctgtcgccggag
cgcgccaaggacatcggcgtcgagaaggtcgatctcgacgatctgctcaggcgcgccgac
ttcatcacgctgcacacgccgctgaccgagaagaccaagaacatcatcgacgcggccgcg
atcgccaagatgaagaagggcgtgcgcctgatcaattgcgcccgcggcggtctcgtcgac
gagcaggcggtggtcgatgcgctcaacgccaagcacattgccggcgccgccttcgacgtc
ttcgtcgaggagcccgcgaccaagagcgtgctgttcggccatcccaacgtgatctgcacg
ccgcatctcggcgcctccaccaccgaggctcaggagaacgtcgcgctgcaggttgccgag
cagatgtcggattacctgctcaccggcgcgatctcgaacgcggtcaacttcccctcgatc
acggcggaagaagcgccgaagctgaaaccgttcatcgcgctcgccgagaagctcggctcg
ttcgccggccagctcaccgagagcggcatcctcaaggtcgagatcacctatgagggccac
gtcgccgagatgaagatcaaggcgatcacctccgcggtgctgtcgggcctgctgcggccc
atgctgggcgaggtcaacgtcgtgtccgcgccggtcgtcgccaaggagcgcggcatggtg
gtggacgagatcgtccgcgccgcgcagagcgattatgagagcctgatcaccgtcacggtc
accaccgagcggcaggagcggtcggtctcgggcaccgtttatgcagacggcaagccgcgc
ctcgtcgacatcaagggcatccgcgtcgacgccgagttcggcaagtcgatgatctacgtc
accaacgaggacaagccgggcttcatcggcaagttcgcggggcttctgggcgacgccaag
attaacatcgcgaccttccatctcggccgggtcgctccgggcagcgatgccattgcgctg
gtcgaggtcgacggtgtggtgccggccgacgtgctcgccaaggtgcaggccctgccgcag
gtcaagcaggccaaggcgctgacgttctga

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