Bradyrhizobium yuanmingense: N2605_11655
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Entry
N2605_11655 CDS
T11816
Name
(GenBank) amino acid decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
byu Bradyrhizobium yuanmingense
Pathway
byu00330
Arginine and proline metabolism
byu00480
Glutathione metabolism
byu01100
Metabolic pathways
byu01110
Biosynthesis of secondary metabolites
byu04148
Efferocytosis
Module
byu_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
byu00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
N2605_11655
09106 Metabolism of other amino acids
00480 Glutathione metabolism
N2605_11655
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
N2605_11655
Enzymes [BR:
byu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
N2605_11655
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
UWU87060
LinkDB
All DBs
Position
complement(2505059..2507416)
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AA seq
785 aa
AA seq
DB search
MDYFKRFNFLFAAPVFDADDLEGVRFNQIIEEIQRSGFEVVRARKLEDAEMAVQTDAAIG
CMVVDWGKKGLEGKTSALINLMRRRGLDFPIILLIRRKRFEDLPVEVLDFIDGYVFLSEE
TPTFIAKNLISRLKQYAETLKTPFFGALVDYAEEGNQLWTCPGHNGGVFYNRSPIGRVFV
EHLGESVFRDDLDNSVLDLGDLLTHEGPALRAQKEAAAIFGAEKTYFVLNGTSTSNKIAL
GALVTDGDLVLFDRNNHKAAHHGALMINGGIPVYVPTVRNAWGLIGPMRWDRLDEKALRE
AIRNHHLVNDRDAWRKERPFRVAVVEQCTYDGSIHSAEMIIRRIGHLCDYILFDEAWAGF
MKFHPLYAGRFAMGLANLSPDAPGIIAMQSTHKQLASFSQASQIHIKDRHIRGQKRRVEH
RRFNESFMQHASTSPFYPLFASLDVGAQMMKGRSGEVLWDDTIRLGIELRKKIRAMRREF
EEKEQNPDRRWFFEPFVPDRVAIADVSRPGAAHNVAWETLSTDELATNPALWQLSPDTNW
HGFPDLAEGFAMTDPNKLTLLTPGFDRATGAYAEHGIPAPVVAQYLRENRIVPEKNDLNS
LLFLLTPGVEASKAGTLISGLVAFKRLHDDNALLADVIPEFYQRRQARYAGVRLRDLCGE
MHRFFRAADVSALQARQFMPEHMPEIAMSPRDAARYLFKNDVDYLPIEAIAGRIATTPFV
VYPPGIATIVPGERLTERAKPMIDYLKMFETCFNTFPGFDVEIQGVYKEVDANGRIGLYT
YVVTE
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggactatttcaagcgcttcaacttcctgttcgccgcccctgtgttcgatgccgacgat
ctcgaaggcgtccgcttcaaccagatcatcgaggagatccagcgctccggcttcgaagtg
gtccgggcccgcaagctggaggacgccgagatggcggtgcagaccgatgccgcgatcggc
tgcatggtggtggactggggcaagaagggcctggaaggcaagacctcggcgctgatcaat
ctgatgcgccgccgcggcctcgacttcccgatcatcctgctgatccgtcgcaagcggttc
gaggatttgccagtcgaggtgctcgacttcatcgacggctatgtcttcctctccgaggag
acgcccaccttcatcgccaagaacctgatcagccggctgaagcaatatgcggagacgctg
aagacgccgttcttcggcgcgctggtcgactatgccgaggaaggcaaccagctctggacc
tgcccggggcataatggcggcgtgttctataatcgcagcccgatcgggcgcgtgttcgtc
gagcatctcggcgaatccgtgttccgcgacgacctcgacaattccgtgctcgacctcggc
gacctcctcacccatgaaggcccggcgctgagggcgcagaaggaagcggcggcgatcttc
ggcgcggaaaagacctattttgtgctcaacggcacctcgacctcgaacaagatcgcgctg
ggcgccctcgtcaccgacggcgatctcgtgctgttcgaccgcaacaaccacaaggccgcc
catcacggcgcgctgatgatcaatggcggcatcccggtctatgttccgaccgttcgcaac
gcctgggggctgatcggcccgatgcgctgggacaggctcgacgagaaggccctgcgcgag
gcgatccgcaaccatcacctggtgaacgatcgcgacgcctggcgcaaggagcggccgttc
cgcgttgccgtggtcgagcagtgcacctatgacggctcgatccacagcgccgagatgatc
atcaggcgcatcggccatctctgcgactacatcctgttcgacgaggcctgggccggcttc
atgaaattccacccgctttatgccggccgcttcgccatggggctggcaaatctttcgccc
gacgcccccggcatcatcgcgatgcagtcgacccacaaacagctggcaagcttctcgcag
gcctcgcagatccacatcaaggatcgccacatccgcgggcagaagcgccgcgtggagcac
cgccgcttcaacgagagcttcatgcagcatgcatcgacctcgccgttctacccgctgttc
gcctcgctcgacgtcggcgcgcagatgatgaagggccgctccggcgaagtgctgtgggac
gacacgatccggctcggcatcgagctgcgcaagaagatccgggcgatgcgccgggagttc
gaggagaaggagcagaatccggatcgccgctggttcttcgagccgttcgttcccgatcgc
gtcgccattgccgacgtcagccgccccggcgcggcgcacaatgtcgcctgggagactctc
tcgaccgacgagctcgccaccaaccccgcgctgtggcagctctccccggataccaactgg
cacggcttccccgatctcgcggaaggctttgccatgaccgatccgaacaagctgacgctg
ctcacgcccgggttcgatcgtgcgaccggcgcctatgccgagcacggcattcccgcgccc
gtcgtcgcgcaatatctgcgcgagaaccggatcgtccccgagaagaacgacctcaactcc
ctgcttttcctgctcacgcccggcgtcgaggcgagtaaggcgggcacgctgatctccggc
ctcgtcgcgttcaagaggctgcatgacgacaatgcactgctggccgacgtcatccccgaa
ttctatcagcggcggcaggcgcgctacgccggtgtgcggctgcgcgacctctgcggcgag
atgcaccgtttcttccgcgccgccgatgtcagcgcgctccaggcccggcagttcatgccc
gagcacatgcccgagatcgcgatgtcaccccgcgatgccgcgcgctatctattcaagaac
gacgtcgactacctcccgatcgaggcgatcgccggccgcatcgcgaccacgccgttcgtg
gtttacccgcccggcatcgccaccatcgtgcccggcgagcggctgacggaacgggccaag
cccatgattgattatctcaagatgttcgagacctgcttcaacacatttccgggcttcgac
gtcgagatccagggcgtctacaaggaggtcgatgcgaacggacgcatcgggctctacact
tatgtcgtgaccgagtag
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