Bradyrhizobium yuanmingense: N2605_19560
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Entry
N2605_19560 CDS
T11816
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
byu Bradyrhizobium yuanmingense
Brite
KEGG Orthology (KO) [BR:
byu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
byu03032
]
N2605_19560 (topA)
03400 DNA repair and recombination proteins [BR:
byu03400
]
N2605_19560 (topA)
Enzymes [BR:
byu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
N2605_19560 (topA)
DNA replication proteins [BR:
byu03032
]
Prokaryotic type
DNA Topoisomerases
N2605_19560 (topA)
DNA repair and recombination proteins [BR:
byu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
N2605_19560 (topA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
UWU81821
LinkDB
All DBs
Position
4158744..4161500
Genome browser
AA seq
918 aa
AA seq
DB search
MNIVIVESPAKAKTINKYLGSSYEVLASFGHVRDLPAKNGSVDPDANFKMIWEVDPKAAG
RLNDIAKSLKGADRLILATDPDREGEAISWHVLEVMKEKRALKDQKIERVVFNAITKQAV
SEAMKHPREIDGALVDAYMARRALDYLVGFTLSPVLWRKLPGARSAGRVQSVALRLVCDR
ELEIEKFVAREYWSLIATLLTPRGDAFEARLVGADGKKIQRLDIGTGAEAEDFKKALELA
TYAVTAVDAKPARRNPQAPFTTSTLQQEASRKYGFAPAHTMRIAQRLYEGIDIGGETTGL
ITYMRTDGVQIAPEAITQARKVIGEDYGNAYVPDSPRQYQAKAKNAQEAHEAIRPTDLSR
RPDSMSRKLDADQAKLYELIWKRTIASQMESAELERTTVDITAKAGSRTLELRATGQVVK
FDGFLALYQEGRDDEEDEDSRRLPAMSQGEAVKRQSLSVTQHFTEPPPRFSEASLVKRME
ELGIGRPSTYASILQVLKDRGYVKLEKKRLHGEDKGRVVVAFLESFFARYVEYDFTASLE
EQLDRISNNEISWQQVLKDFWTGFIGAVDDIKELRVAQVLDVLDDMLGQHIYPPRADGGD
IRQCPNCGTGRLNLKAGKFGAFVGCSNYPECRYTRQLAADGEATADRSLGQDPDTGRDVW
VKAGRFGPYIQLGEQKDYEEGEKPKRAGIPKGTSPSDVDLELALKLLSLPREIGKHPETG
QPITAGLGRFGPFVKHEKTYASLEAGDEVFDIGLNRAVTLIAEKVAKGPSRRFGADPGKA
LGDHPTLGTVTVKSGRYGAYVTAGGVNATIPAEFEKDTITLPQAIALIDERAAKGGGKGG
GKAKKAAKPAKAKKASEKAADGEDAAPKPKKPAAKKAAAKSKSESTSKARAAVPSTAKTS
PTKAAATKAPAKKSAGKT
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgtcattgtggagtcgccggcgaaagccaagacgatcaacaaatatctgggc
tcgtcctatgaggttctggcctcgttcggccatgtccgcgatctcccggcgaagaatggt
tccgtcgatcccgacgccaatttcaagatgatctgggaggtcgaccccaaggcggccggc
cggctcaacgatatcgcgaagtcgctgaagggcgccgaccgcctgattctcgccaccgac
cccgatcgcgagggcgaggccatctcctggcacgtgctcgaggtgatgaaggagaagcgc
gcgctgaaggatcagaagatcgagcgcgtggtgttcaacgccatcaccaagcaggccgtc
tcggaggcgatgaagcatccgcgcgagatcgacggcgccctggtcgacgcctacatggcg
cgccgcgcactcgactatctggtcggcttcaccctctcccccgtgctgtggcgcaagctg
ccgggcgcccgctcggccggccgcgtgcagtcggtggcgctgcgcctcgtctgcgaccgc
gagctcgagatcgagaagttcgtagcccgcgaatattggtcgctgatcgcgaccctgctc
accccgcggggcgatgccttcgaggcccgcctcgtcggcgccgacggcaagaagatccag
cgcctcgacatcggcaccggcgcggaagccgaagactttaagaaggcgctggaactggcg
acttacgccgtcaccgcggtcgatgccaagccggcccgtcgcaatccgcaggcgcccttc
accacctcgacgctgcagcaggaagccagccgcaaatacggctttgcgccggcccatacg
atgcgcatcgcccagcgtctttatgagggcatcgacatcggtggcgagaccaccggactc
attacttatatgcgtaccgacggcgtgcagatcgcccccgaggcgatcacccaggcgcgc
aaggtgatcggcgaggattacggcaacgcctacgtgccggatagcccgcgccagtaccag
gccaaggccaagaacgcccaggaagcgcacgaggcgatccgcccgaccgacctctcccgc
cgccccgacagcatgagccgcaagctcgatgccgatcaggccaagctgtatgagctgatc
tggaagcgcaccatcgcgagccagatggaatccgccgagctcgagcggaccaccgtcgac
atcacggcgaaggcgggctctcgtacgctggagctgcgcgccaccggccaggtcgtcaag
ttcgacggcttcctcgcgctctaccaggaaggccgcgacgacgaggaggacgaggattcc
cgccgcctgcccgcgatgagccagggcgaggccgtgaaacggcagagcctgtccgtcacc
cagcatttcaccgagccgccgccgcgattctcggaagcatcgctcgtcaagcgcatggag
gagctcggcatcggccggccctcgacctatgcctcgatcctccaggtcctgaaggaccgc
ggctacgtcaagctggagaagaagcgtctgcacggcgaggacaagggccgcgtcgtggtc
gccttcctcgaaagcttctttgcccgctatgtcgagtacgactttacggcgagcctcgaa
gagcagctcgaccgcatctccaacaacgagatctcctggcagcaggttctgaaggacttt
tggaccggcttcatcggcgccgtcgacgacatcaaggagctgcgcgtcgcccaggtgctc
gacgtgctcgacgacatgctgggccagcacatctatccgccccgcgccgatggcggcgat
atcaggcagtgcccgaactgcggcaccggccggctgaacctcaaggccggcaagttcggc
gccttcgtcggctgctcgaactatccggaatgccgctacacccgtcagctcgccgccgat
ggcgaggcgactgctgaccgttcgctcggccaggatcccgacacgggtcgcgatgtctgg
gtcaaggccggccgcttcggcccctatatccagctcggcgagcagaaggattatgaggaa
ggcgagaagcccaagcgcgccggcattccgaagggcacctcgcccagcgacgtcgatctc
gagcttgcgctgaagctgctgtcgctgccgcgcgagatcggcaagcatccggagaccggc
cagccgatcaccgcgggcctcggccgcttcggaccgttcgtgaagcacgagaagacctat
gcgagcttagaggccggcgacgaggtgttcgacatcggcctcaatcgtgcggtgacgctg
atcgcggagaaggttgccaagggcccgagccgccgcttcggcgccgatcccggcaaggcg
ctcggcgatcatccgacgcttggcaccgtcaccgtgaagagcggccgttacggcgcctat
gtcaccgcgggcggcgtcaacgcgacgatcccggccgagttcgagaaggacaccatcacg
ctgccgcaggcgatcgcgctgatcgacgagcgcgccgccaagggtggcggcaagggcggc
ggcaaggccaagaaggcggcgaagccggccaaggccaagaaagcgtcagagaaggctgcg
gacggcgaggacgccgcaccgaagccgaagaagccggctgcgaagaaagccgcggccaaa
tccaaatccgaatccaccagcaaggcgcgcgccgccgtgccgtcgaccgcaaagacgtcg
ccgaccaaggcagccgccaccaaggctccggccaagaagagtgccggcaagacctga
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