Bradyrhizobium yuanmingense: N2605_25500
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Entry
N2605_25500 CDS
T11816
Symbol
nifA
Name
(GenBank) nif-specific transcriptional activator NifA
KO
K02584
Nif-specific regulatory protein
Organism
byu Bradyrhizobium yuanmingense
Pathway
byu02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
byu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
N2605_25500 (nifA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
byu03000
]
N2605_25500 (nifA)
Transcription factors [BR:
byu03000
]
Prokaryotic type
Helix-turn-helix
Other families
N2605_25500 (nifA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
GAF
HTH_8
GAF_2
AAA_5
AAA
Mg_chelatase
AAA_2
AAA_3
bpMoxR
AAA_16
GAF_3
TIP49
MCM
AAA_30
HTH_28
AAA_7
Motif
Other DBs
NCBI-ProteinID:
UWU82925
LinkDB
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Position
complement(5429270..5431090)
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AA seq
606 aa
AA seq
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MQDQARQPEHGSKEDNQDNGDRLMLHIPSSSERPASQPDPERKPSEVPSYEGALNGIFEI
SKILSAPDYLEVTLARVVGLLQSFVQMRHGIVSLFDDDGVPETTVGAGWSEGNDERYRTC
LPQKAIEQIVATDRPLVVENVAAEPAFSAADREVLGASDSMPVSFIGVPIRIDPRVVGTL
TIDRTQDDSSSLRLEYDARLLAIVANLVGQTVKLHRLSACERERLPAEKDQPQKQIVELG
RPARERKKLHAHGIIGDSAALSGLLEKIAVVAQSNSTVLLRGESGTGKELVARAIHESSS
RAKRPFVKLNCAALPETVLESELFGHEKGAFTGAVGSRKGRFELADKGTLFLDEIGEISA
PFQAKLLRVLQEQEFERVGSNHTIKVDVRVIAATNKNLEEAVTRSEFRADLYYRISVVPL
LLPPLRERRSDIPLLAREFLRKFNSENGRTLTLEASAIDVLMNCGFPGNIRELENCIERT
ATLCAGSSIVRSDFACCQGQCLSMMLWKGTSDDKPEQAVPMQPVPAKSLIPPAQTTLPPQ
SIGEMTSLAPAGRVLDSGARMADRERVIAAMEKSGWVQAKAARLLGLTPRQIGYALRKYG
IEIKRF
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaccaagctcgccaacccgaacatggctccaaggaggataatcaagacaacgga
gacaggctcatgctgcatattccatcctcgagcgaaagacctgcctcgcagccggacccg
gagcgtaagccctcggaggtgccgtcttatgagggcgctctgaacggcatcttcgaaata
tcgaaaatactcagcgcccctgattatctcgaagtcacgctggccagggtcgttggcctc
ctgcaatcgtttgtgcagatgcgacacggcatcgtctcactgttcgatgatgacggtgtg
ccggaaactacagttggcgccggctggagcgaaggcaatgacgaacgttaccggacctgc
ctgccgcagaaagcaatcgagcagatcgtagcgacagacaggcctcttgtcgtcgagaat
gtagccgccgagccggccttcagcgctgccgaccgggaggttctaggtgcctccgatagt
atgcccgtatcgttcatcggggttccgattcgcattgatccaagggtcgttggtacgctg
acgatagatcgtacccaggacgatagttcaagtcttcgactcgagtacgatgctcggctg
ctcgccatcgtcgccaacctggtaggacaaacagtgaagttgcaccgcttgtccgcctgc
gagcgagaacgactgccagcggagaaagaccagccacagaagcagatagttgaactcggg
cggcccgctcgcgagcgcaagaagcttcacgcccacgggatcattggcgacagcgctgcg
ctgagcgggctgctcgagaagattgcggttgtggcccaatcgaacagcacggttctgctg
cgtggcgaatccggtaccggcaaggagctcgtagccagggccattcacgagtcttcgtcc
cgtgctaagcggccgttcgttaagctgaattgcgcggcgctccctgagacggttctggaa
tcggaattgtttggccacgagaaaggtgcctttaccggtgcggtcggctcgcgcaagggg
cgcttcgagttggctgacaaagggacgctgtttctggatgagatcggcgagatctcagct
ccgttccaggcgaagttgctgcgagttctgcaagagcaggagttcgagcgcgtgggcagc
aatcacacgattaaggtcgatgttcgagttatagctgcgactaacaagaaccttgaagag
gccgtgacaaggagcgagttccgcgcggacctctactatcgtattagcgtagttcccttg
ttgttgccgccgctgcgcgaaagacgcagtgatattccgctgctggccagagagttcctc
agaaagttcaacagtgagaacggccgtacgctgaccctggaggcgagtgcgatcgatgta
ctgatgaactgcgggtttccgggaaatatccgcgaactcgaaaactgcatcgagcgaaca
gcgacgctgtgtgccggatcatcgattgtgagaagtgactttgcctgctgccaagggcag
tgcctttccatgatgctctggaaaggaacatcggacgacaagccagaacaggcggtaccc
atgcaaccggtgcccgcaaagtcgctcattccgccagctcaaacgaccttgccgccgcag
tctatcggcgaaatgacctcacttgcacctgccggcagagttctcgatagcggtgcgagg
atggccgatcgcgaacgggtcatcgcggccatggaaaaatctggctgggtgcaggctaag
gcagcgcgcctactcgggctaaccccgcgccaaatcggctacgcgctacggaaatacgga
atcgagataaagcggttctga
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