Bradyrhizobium yuanmingense: N2605_30590
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Entry
N2605_30590 CDS
T11816
Name
(GenBank) VCBS domain-containing protein
Organism
byu Bradyrhizobium yuanmingense
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Paralog
GFIT
Motif
Pfam:
Laminin_G_3
Cadherin_4
FecR
Laminin_G_2
Big_9
Laminin_G_1
Pentaxin
HemolysinCabind
R_equi_Vir
pXO2-29_C
Motif
Other DBs
NCBI-ProteinID:
UWU83816
LinkDB
All DBs
Position
complement(6598411..6603783)
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AA seq
1790 aa
AA seq
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MDGQGSRSPVGANIDSFTAKANGHAPDGAFVVPDPNLIFNGEFKRAGLDLVLSHDGHEFV
VHDYFRGDKRAALASPDGAHLSGDVVNALTGHVQVAQAAPGAGAGQVIGHVTKLVGSATA
IRNGVSVILNNGDNVEKGDVVSTGADSTLGITFIDGTVFGLSSNARMVLNEMVYDPNGSN
NSSLLSLVAGTITFVAGETAKRGDMKVDTPVATMGIRGTAVLTQINFVVPAGGGDPQPQA
SFQVLVEPNGTTGSYILFDKVTLLPIATVNQAGQMIQISGGNVSITNALMSPEVQKLITD
VFTLKFTDNNTNTKLTTNYTDTITPFGYEVLLKSSSGPSATATFVNLNPQGSETPTTSTP
LIVRIPGQPIAQSFDASGNVKTAFALTERADTTGDTRADTISGVIRFVDQNLGDRPTVSI
SLAEAPNYVYKTAGQNDVTGSLSELQKQGIAATQIQISVVPDPANNNNGSAVWTYTIPDH
VFDFLAAGETLTLTYMVRVDTNFTVNPESRFIPITITITGTNDKPTVATSGGTVIEQVGT
GNEALDIITGTVTFTDVDLTDRPIVSAALSSVEPFKYLDAEGNDITASLTPEQLAAIAAV
KVPLTVVQGAGNSNNGTATWTYSVPDHLFDFLAEDEKLILNYVVQVDDGHGGVVSTPITV
SIDGADVNVEGTNDVPTIVEDSTTPTGEVTEDTAAILTANGTVAFNDPDLTDTHTASYVL
QSTTSNAHLPGFGSGTSHIGTFALTAVSENPGVSTRGSVGWTFTLNDNDPVLQSLAEGQT
ITQVYTVTVDDHHGGTVTRDVTVTITGTNDTPTITSDADAAKGSVTEDACATLSIEGTLA
IQDLDLIDTHTAQAAFKSATSNAHLPGFDGNAPLGTFTIDCEVAEFNTDTDNSATLGWHF
SLDNDNAVLQSLAHGQTITQVYTVTFTDDHGAQVSQDVTVTINGANDAPTITSDPEAATG
AVTEDDGASLTTSGTLAIQDVDLIDTHTAQVQFKSSSVSSALPGFEDDSTNIGTFSIGAV
SESNADTSTGATLDWHFTLDNNDPVLQSLAEGQTITQVYTVTFKDNHNATVTQDVTVTIT
GTNDAPTVSYVTSDYMNFDGATIAVGDVPTVATDDVTLDGWVNWNGDAASASQVLFYNGN
TSTTGFGLMGTVISGKLEIAILEGGVEIQDTGFALTAGQWHNLALTRDDGIFTLYVDGNA
VYSHSGGVNAIAGAQEPSYMMIGAASGRYAPGFGTQGFTGSIADVSVWTTALTQAQIQSY
DFTALTGNEANLAAYYTLGDGSGSTASNTVNPTKSLAIEGDADWASGTSGPGGAFADLME
TNGGQLSHGVLAVSDVDATDHVTVSVDAVQVKLDNVLQTGSVGGLSHADLLNYLTVPSGD
ILNGTATHAQFTWQFNSAGQAFDFLAAGQTLSLQYTIVPSDAQGFGTSAVVTINITGTND
APTLSDLHIGPLTDTADDDTFSNLTGQLAGTDADSGETAPLTYAVLNSDHQAATTVAGLY
GSLTVNSNGSYSYVPNDAAINALADGSYVDTFTVQTTDIHGATDTATLKVNVTGADDGAG
PVINTESFQVEHITENSNEIITDLVVMDADPGAATDTFTVTLSTANPDVSLASVYPTTGT
LEQINTALAQGAGIVYEPTGADPEAGLPATDQITLTVADSAGRSDTVNFIFVEGAESQGM
TLQGTAGKDVIFATESSDTLIGGSAKDQFVFAPASSQDSVQHTVNDFEYGLDKLDLRQFS
GISSLNDLAPTAAQDGGTLLTLDSHETILLKGVAVANLQSSDFIFGTHVG
NT seq
5373 nt
NT seq
+upstream
nt +downstream
nt
ttggacggccagggttcccgctcgcccgtcggggcaaatatcgattcttttaccgcaaag
gcgaacggtcacgcgcccgacggcgcgttcgtcgttcccgaccccaatctgatcttcaac
ggcgagttcaagcgtgccgggctcgaccttgtgctgtcccacgacggtcatgagttcgtc
gttcacgattatttcaggggcgacaagcgcgccgcgctcgcttcgcccgacggcgcccac
ctcagcggcgacgtcgtcaacgccctcaccggccatgtccaggttgcccaggccgcgccc
ggtgccggtgcgggccaggtcatcggtcacgtcaccaagctcgtgggaagcgcgaccgcg
atccgcaacggcgtctcggtcatcctgaacaatggcgacaacgtcgagaagggcgacgtg
gtctcgaccggcgccgactcgacgctcggcatcaccttcattgacggcaccgtgttcggc
ctgtcctccaacgcgcggatggtgctgaacgagatggtctacgaccccaacgggtcgaac
aattcctcgctgctcagcctcgtcgcgggcaccatcaccttcgtcgccggcgaaaccgcc
aagcgcggcgacatgaaggtcgacacgcccgtcgccaccatgggcatccgcggcacggcg
gtgctgacccagatcaacttcgtcgttcccgccggcggcggcgatccgcagccgcaggcg
agcttccaggtgctggtcgagccgaacggcacgaccggctcctacatcctgttcgacaag
gtcacgctgctgccgatcgcgacggtcaaccaggccggccagatgatccagatcagcggc
ggcaacgtctcgatcaccaatgcactgatgtcgccggaggtgcagaagctgatcacggac
gtgttcacgctgaagttcaccgacaacaacaccaacactaagctgaccacgaactacacc
gatacgatcacgccgttcggctatgaggtgttgctcaaatcgtcgtccggccctagcgcc
accgcaacattcgtcaatctcaatccgcagggatcggagacgcccaccacctccacgccg
ctcatcgtacgcattcccggccagccgatcgcgcagagcttcgacgcgagcggcaacgtg
aagacggcgttcgcgttgacggagcgtgcggacacgaccggcgacacgcgcgccgacacg
atttccggcgtgatcaggttcgtcgatcagaacctcggcgaccggccgacggtgagcatc
agcctcgccgaggcgccgaactacgtgtacaaaaccgcgggccagaacgacgtcaccggc
tccctctcggagctccagaagcagggcatcgcggcgacgcagatccagatcagcgtcgtc
cccgaccccgccaacaacaacaacggctcggcggtctggacctacacgatccccgaccac
gttttcgacttcctcgcggccggcgaaaccctgacgctgacctacatggtccgcgtcgac
accaatttcacggtgaaccccgagtccaggttcatcccgatcaccatcacgatcacggga
acgaacgacaagcctaccgttgcgacgtcaggcggcaccgtcatcgaacaggtcgggacc
ggcaacgaggcgctggacatcatcacgggcacggtcaccttcaccgacgtcgatctgacg
gaccggccgatcgtgagcgcggcgctctcatccgtcgagccgttcaaatatctcgatgcc
gaaggcaacgatatcactgcgtccctgacgccggagcaactcgcggcgatcgctgccgtc
aaagtgccgctgaccgtggttcagggtgccggaaacagcaacaacggcacggccacctgg
acctacagcgttcccgaccatctcttcgacttcctggccgaggacgagaagctgatcctc
aactacgtggtgcaggtcgatgacgggcacggcggcgtcgtcagcacgccgatcaccgtg
tccatcgacggtgcggacgtcaatgtcgagggcaccaacgacgtgccgacgatcgtcgag
gactcgacgacgcccaccggagaagtgacagaggatacggcggcaatcctgacggcgaac
ggcaccgtcgccttcaacgaccccgatctcacggatacgcacactgccagttacgtcctg
cagtcgacgacgtcgaacgcgcatctgcccggcttcggcagcggcacctcgcatatcggg
accttcgcgctgaccgcggtgagcgagaatccgggtgtcagcacgcgcggatcagtgggt
tggaccttcacgctcaacgacaacgatccggtgctgcagtcgctggccgaaggccagacc
atcacccaagtctacaccgtgaccgtcgacgaccatcacggtggcaccgtcacccgggac
gtcacggtcaccatcaccggcaccaatgacacgccgaccatcacgagtgatgcagacgct
gcaaagggcagcgtcaccgaggatgcctgcgcgacgctgtcgatcgagggcacgctcgcg
attcaggatctcgatctgatcgacacccacaccgcgcaggccgcattcaagtcggcgacg
tcgaacgcgcatctgccgggcttcgatggtaatgcgccgctcggcaccttcacgatcgat
tgcgaggtcgcggagttcaacaccgataccgacaacagcgcgacgctgggctggcacttc
agcctcgacaacgacaatgcggtgctgcaatcgctggcgcatggccagaccatcacccag
gtctacaccgtcacctttactgacgatcacggtgcgcaggtctcccaggacgtcactgtc
acgatcaacggcgccaacgacgcgccgacgatcacgagcgatcccgaggcggcaacgggt
gcggttaccgaggatgacggcgcctcgctgacgaccagcggtacgctggcgatccaggac
gttgacctgatcgacacccatacggcgcaggtgcagttcaagtcatcgtccgtcagttcg
gctctgccgggattcgaggacgacagcacgaatatcggcaccttctccatcggcgcggtg
tccgaatccaacgccgacaccagcaccggcgcgacgctcgactggcacttcacgctcgac
aacaacgatcccgtgctgcagtcgctggcggaagggcagaccataactcaggtctacacc
gtcaccttcaaggacaatcacaacgcgactgtcacgcaagacgtcaccgtcaccatcacc
ggcaccaacgatgcgccgaccgtctcctatgtgacgtccgactacatgaacttcgacggt
gcgaccatcgcggtcggcgacgtaccgacggtcgccaccgacgacgtgacgctggacggc
tgggtgaactggaacggagacgctgcctccgccagccaggtcttgttctacaatggcaat
acctcgaccaccggtttcggcctcatgggcactgtcatcagcggcaagctggagatcgcg
attctcgagggcggcgtcgagatccaggataccggcttcgcgcttactgcggggcaatgg
cataacctcgccttgacgcgtgacgacggcatcttcacgctttatgtcgatggcaacgcc
gtctattcccacagtggcggcgtcaacgcgatcgctggcgctcaggagccgtcctacatg
atgattggagcggcgagcggcaggtacgctccgggcttcggtacgcaaggcttcaccggc
tcgatcgccgatgtcagcgtctggaccaccgcactcacgcaggcgcaaatccagtcgtac
gacttcaccgcgctcaccggcaacgaggccaatctggccgcctattatacgcttggcgac
ggcagcgggagcacggcctccaacacggtcaacccaaccaagagcctcgccattgaaggt
gatgcggattgggccagcgggacctccgggccgggcggcgcatttgccgatctgatggag
accaatggcggccagctctcgcatggcgtgctggcggtctccgacgtcgacgcgaccgat
cacgtcacggtatcggtcgatgcggtgcaggttaagctcgacaacgtgttgcaaacgggc
agcgtcggcgggctgtcgcatgccgatctcctgaactatctgaccgtgccgtccggcgac
attctcaacggcacggcgacccacgcccagtttacctggcaattcaactcggccggccag
gccttcgacttcctcgccgccggtcagacgctatcgctgcaatacaccatcgttccgtcg
gatgctcagggctttggaactagcgcggtcgtgaccatcaacatcaccggcacgaacgac
gcaccgacgctgtccgatctccacatcggcccgctcacggacaccgctgacgacgacacc
ttctccaatctcaccgggcaactggcggggaccgacgccgacagcggtgagacggcgccg
ctgacctatgccgtcctcaattcagatcaccaggcggccacgacggtcgcgggactctac
ggctcgctgacggtcaattccaacggcagctacagctacgttccgaatgatgctgcgatc
aatgcgttggcggacggatcgtatgtcgatacgttcacggtccagaccacggatatccat
ggtgcgaccgacacggcaacgctcaaggtgaacgtgaccggtgcggacgacggtgcgggc
ccggtcatcaacaccgagagcttccaggtcgagcacatcaccgagaacagcaacgagatc
attaccgacctcgtcgtcatggacgccgatcccggcgctgcgacggacactttcacggtc
acgctgtcgaccgcgaatccggacgtcagcctcgcaagtgtttatccgacgaccggcacg
ctcgagcagatcaacaccgccctcgcgcaaggcgcgggcatcgtctacgagccgaccggc
gctgatcccgaggcgggactgcccgccaccgatcagatcacgctgaccgttgccgattcg
gcgggccgctcggacacggtgaacttcatcttcgtcgaaggagccgagagccagggcatg
accctgcaaggtaccgccggcaaggacgtcattttcgcgaccgagtcgagtgatacgctg
atcggcggcagtgccaaggatcagttcgtattcgcaccggcctcgtcgcaggattcggtt
cagcacaccgtgaatgatttcgagtacggcctcgacaagctcgacctgcggcagttcagc
ggcatcagctccttgaacgaccttgccccgaccgccgcgcaggatggcggcacgttgctt
acgctggatagccacgagacgatcctgctcaagggtgtcgccgtcgcgaatctccagtcc
agcgatttcatcttcggcactcacgtcggctag
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