KEGG   Bradyrhizobium yuanmingense: N2605_34640
Entry
N2605_34640       CDS       T11816                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
byu  Bradyrhizobium yuanmingense
Pathway
byu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:byu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    N2605_34640 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:byu03021]
    N2605_34640 (rho)
   03019 Messenger RNA biogenesis [BR:byu03019]
    N2605_34640 (rho)
Transcription machinery [BR:byu03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     N2605_34640 (rho)
Messenger RNA biogenesis [BR:byu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     N2605_34640 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB AAA_25 AAA_22 NACHT S1CSD-TOTE-2 AAA Fungal_virus_P2_C Spore_III_AA
Other DBs
NCBI-ProteinID: UWU84567
LinkDB
Position
complement(7479853..7481118)
AA seq 421 aa
MREIKLEDLKSKTPAELVSFAEENGVENASTMRKQELLFAILKQLALAETDIVGQGVVEV
LSDGFGFLRSPDANYLPGPDDIYVSPSQIRRFGLRTGDTIEGHIRSPKEGERYFALLKVN
TLNFEDPEKAKHKVNFDNLTPLFPNQRFRMEIDDPTRKDLSARVIDIVAPIGKGQRALIV
APPRTGKTVLMQNIAHSITHNHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEPAV
RHVQVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRP
KRFFGAARNIEEGGSLTIIATALVDTGSRMDEVIFEEFKGTGNSELILDRKVSDKRTFPA
IDISRSGTRKEELITDPQVLKKMYVLRRILNPMGTMDAIDFLLDKLRSTKSNSEFFDSMN
T
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgcgggaaatcaaactcgaagacctcaagtccaaaacgccggccgagctcgtctcgttc
gcggaggagaatggggtcgagaatgccagcaccatgcgcaagcaggagctgctgttcgcc
atcctcaagcagctggcgctcgccgagaccgatattgtcggccagggcgtcgtcgaagtt
ctctccgacggcttcggctttctccgctcgcctgacgcgaattatctgccgggtcctgac
gacatctacgtgtcgccctcgcagatccgccgtttcggcctgcgcaccggcgacaccatc
gaaggtcacatccgcagcccgaaagagggcgagcgctacttcgcgctgctgaaggtcaac
acgctcaatttcgaggatccggaaaaggccaagcacaaggtcaatttcgacaacctcacg
ccgctgtttccgaatcagcgtttccgcatggagatcgacgatcccacgcggaaagacctg
tctgcacgcgtgatcgacatcgtcgcgcccatcggcaagggccagcgcgccttgatcgtg
gcaccgccgcgtaccggtaaaaccgtgctgatgcagaacatcgcgcattcgatcacgcac
aatcaccccgaatgctatttgatcgtgctcttgatcgacgagcgtccggaagaagtcacg
gacatgcagcgctcggtgaagggcgaggtcgtgtcctcgaccttcgacgagccggcggtg
cgccacgttcaggtcgccgagatggtgatcgagaaggcaaaacgcctggtcgagcacggc
cgcgacgtcgtgatcctgctcgattcgatcacgcgcctcggccgcgcctacaacaccgtg
gtgccgtcatccggcaaggtgctgactggcggtgtcgacgccaacgcgctgcagcgtccg
aagcgcttcttcggcgcggcccgcaacatcgaagagggcggctcgctgaccatcatcgcg
accgcgctggtcgataccggcagccgcatggacgaagtcatcttcgaagagttcaagggc
accggtaactcggagctgatcctggaccgcaaggtctcggacaagcgcaccttcccggcg
atcgatatctcgcgctccggcacccgcaaggaggagctcatcaccgatccgcaggtgctc
aagaagatgtacgtgctccgccgcatcctcaatccgatggggacgatggacgcgatcgac
ttcctgctcgacaagctgcgctcgaccaagagcaattcggagttcttcgactccatgaac
acctga

DBGET integrated database retrieval system