Bradyrhizobium yuanmingense: N2605_35420
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Entry
N2605_35420 CDS
T11816
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
byu Bradyrhizobium yuanmingense
Pathway
byu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
byu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N2605_35420 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
byu03019
]
N2605_35420 (pnp)
03016 Transfer RNA biogenesis [BR:
byu03016
]
N2605_35420 (pnp)
Enzymes [BR:
byu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
N2605_35420 (pnp)
Messenger RNA biogenesis [BR:
byu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
N2605_35420 (pnp)
Transfer RNA biogenesis [BR:
byu03016
]
Prokaryotic type
tRNA degradation factors
N2605_35420 (pnp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
S1
PNPase
RNase_PH_C
KH_1
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
OB_PDCD11
DUF5813
Motif
Other DBs
NCBI-ProteinID:
UWU84716
LinkDB
All DBs
Position
complement(7639600..7641762)
Genome browser
AA seq
720 aa
AA seq
DB search
MFNKHSVEIDWGGRPLKLETGKIARQADGAVVATYGETVVLATVVAAKAPREGVDFLPLT
VDYQEKAYAAGRIPGGYFKREGRPTEKETLVSRLIDRPIRPLFVDGWRNETQVIVTVLSH
DMENDPDIVAMVAASAALTLSGVPFKGPIGAARVGFANDEFILNPTLDEMVDTQLDLVVA
GTADAVLMVESEAKELNEDIMLGAVMFGHRHFQPVINAIIDLAEKAAKEPREVTVIDNAA
LEKEMLGLVEQELRAAYAIPIKQDRYAAVGKVKEKVMAHYFPEGQEPQYDKLRIAGVFKE
LEAKIVRWNILDTGKRIDGRDSKTVRNIVAEVGVLPRAHGSALFTRGETQAMVVTTLGTG
EDEQYIDALSGTYKETFLLHYNFPPYSVGETGRLGGTKRREIGHGKLAWRAIRPVLPPHH
EFPYTTRVVSEITESNGSSSMASVCGASLALMDAGVPLKRPTAGIAMGLILEDKRFAVLS
DILGDEDHLGDMDFKVAGTEAGITSLQMDIKIEGITEEIMKVALAQAKDGRIHILGEMAK
ALTAARAELGEYAPRIETFKIATDKIREVIGTGGKVIREIVEKTGAKVNIEDDGTVKVAS
SDGEAMKAAIKWIKSIASDPEVGQIYDGTVVKVMEFGAFVNFFGSKDGLVHISQLAANRV
QKTSDVVKEGDKVKVKLLGFDDRGKTRLSMKVVDQTTGEDLEGKEKAAEGEKAPREAAGE
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgttcaataagcattcagtcgaaatcgactggggcggacgcccactcaagctcgaaacc
ggcaagatcgcccgccaggccgacggcgccgtcgtcgccacctatggcgagaccgtggtg
ctcgccaccgtcgtcgcggcgaaggcgccgcgcgaaggcgtcgacttcctgccgctgacc
gtcgattaccaggaaaaggcctacgctgcgggccgcattcccggcggctatttcaagcgc
gagggccgtccgaccgagaaggagacgctggtctcccgcctgatcgaccgaccgatccgc
ccgctgttcgtcgacggctggcgcaacgagacccaagtgatcgtcaccgtgctgtcgcac
gatatggagaatgatcccgacatcgtggcgatggtcgcggcctccgcggcgctgaccctg
tccggcgtgcccttcaagggcccgatcggcgcggcgcgcgtcggctttgccaatgacgag
ttcatcctcaatccgacgcttgacgagatggtcgacacccagctcgacctcgtggtcgcc
ggcactgccgacgccgttctgatggtggaatcggaagccaaggaactgaacgaagacatc
atgctcggtgcggtgatgttcggtcaccgccacttccagccggtcatcaacgcgatcatc
gacctcgccgagaaggctgcgaaggagccgcgcgaagtcactgtcatcgacaatgcggcg
ctcgagaaggaaatgctcggcctggtcgagcaggaactgcgcgccgcctacgccattccg
atcaagcaggatcgctacgccgcggtcggcaaggtcaaggaaaaggtgatggcccattac
ttccccgaaggccaggagccgcaatacgacaagctgcgcatcgccggcgtgttcaaggag
ctggaagccaagatcgttcgctggaacatcctcgacaccggcaagcgcatcgacggccgc
gacagcaagacggtgcgcaacatcgtcgccgaagtcggcgtgctgccccgcgcccacggc
tcggcgctgttcacccgcggcgagacccaggcgatggtcgtgaccacgctcggcaccggc
gaggacgagcagtacatcgacgcgctgtccgggacgtacaaggaaacgttcctgctgcat
tacaacttcccgccctattcggtcggcgagaccggccgcctcggcggcaccaagcgccgc
gaaatcggccacggcaagctggcctggcgcgcgatccgtccggtgctgccgccgcaccat
gaattcccctacaccacgcgcgtggtgtcggagatcaccgagtcgaacggctcctcgtcg
atggcttcggtctgcggcgcctcgctggcgctgatggatgcgggcgtgccgctgaagcgg
ccgaccgcgggcatcgcgatgggcctgatcctcgaggacaagcgctttgcggttctctcc
gacattctcggcgacgaggaccatctcggcgacatggacttcaaggtcgccggcacggaa
gcgggcatcacctcgctccagatggacatcaagatcgagggcatcaccgaagagatcatg
aaggtcgcgttggctcaggccaaggacggccgcatccatatcctcggcgagatggccaag
gccctcaccgcggcccgcgccgagctgggcgaatatgcgccgcgcatcgagaccttcaag
atcgccaccgacaagatccgcgaggtgatcggcaccggcggcaaggtgatccgcgagatc
gtcgagaagaccggcgccaaggtcaacatcgaggatgacggcaccgtgaaggtcgcctcc
agcgacggcgaggcgatgaaggcggcgatcaagtggatcaagtcgatcgcgtccgatccg
gaagtcggccagatctatgacggcactgtcgtcaaggtgatggagttcggcgccttcgtg
aacttcttcggttccaaggatggtctcgtccacatcagccagctcgcggccaaccgcgtg
cagaagacctccgacgtcgtcaaggaaggcgacaaggtcaaggtcaagctgctcggcttc
gacgatcgcggcaagacccgcctgtcgatgaaggtggtcgaccagaccaccggtgaggat
ctcgagggcaaggagaaggccgccgagggcgaaaaggccccgcgcgaagccgccggcgag
taa
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