Bipolaris zeicola: COCCADRAFT_10207
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Entry
COCCADRAFT_10207 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
bze
Bipolaris zeicola
Pathway
bze03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
COCCADRAFT_10207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bze03036
]
COCCADRAFT_10207
Chromosome and associated proteins [BR:
bze03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
COCCADRAFT_10207
SWR1 complex
COCCADRAFT_10207
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HSA
DEAD_2
Motif
Other DBs
NCBI-GeneID:
19142485
NCBI-ProteinID:
XP_007718588
JGI:
10207
UniProt:
W6XJ30
LinkDB
All DBs
Position
Unknown
AA seq
1702 aa
AA seq
DB search
MEEVTAADRDYDSIPPRDSTDAPSPSAIAPHGHGTDDDDNAPLTANDGEQLASVNGHDGG
VIGRPAKRRKLEDTTTTPRRSTSRAASPPWKSFVADGPTTVFENGVRKSSRVNRETAPPT
PEPTKPISRPASKATHTNGTPKSATRRESRNGSGPTSVPKGKAASALARKASAQSLTTPA
RKSERNTKTSALAKQTPVMSPQLQNGSPGGGVRKRGTRQRRGMQVPTDPPGDEFMDTPDT
NGHDPDAGLYASPDGSNPSIPAPRLRLRLRKPDPPNRHPHHAPPKSQFTSLEEWLQQDDP
LEGEESLRITQEKAQDEAQRRLRIVEAAEHGVLSQERCTVYAPEAAPEPPAQYGHWDHVV
AHTLHFNKLLKEEKAFHRRTAKILAREAYEFWKNKFKRKSQDEIEQEETERQVARYKQVV
KDVKDAWGLVKVEIDKERVAKYEEEQLQLGHKAMDDMFNQAQEILGGRTAGDGASSLMSE
DRDFDDMEDFESAVSNTSEQQLDDDVMSSSSDSEPENEQDDDANLTAEQLREKYGQLPDL
PATSSEDEDDYGDEEEEEGTPAPTPDPDIETEDLDDPPETLANGFHDHEENEDEKKPGYI
DPATVELDQVDDALMDSENDDKSSESGSEAWSSNEGSGTEDDGDDADDSEAEDDDNSGEE
DIGLMGFLAPKDVKKLKEAAKTAIEDNEPESEEQTAEQVNGHADTSMKDEEEKPHVNGHG
AVAINNEPCVNGNAAPSEPAPSIEVAEPQQSVEPTETTPMEDVVQSKNVSRSRHASSPPR
TEVPFLLRGTLREYQHDGLDWLANLYESDTNGILADEMGLGKTIQTISLLAYLAVRHEIW
GPHLVVVPTSVMLNWEMEFRKFLPGFKILTYYGDINERKRKRLGWRNTGKDMYNVVITSY
QLILQDAAAFKMRPWRYLVLDEAHNIKNFKSQRWQTMLNLRTERRLLLTGTPLQNNIDEL
WSLLYFLMPAGFAGEGRIAGLEEFTLALKNPTSQILDQGRQQLDAEAQKIVKRLHEVLRP
YLLRRLKSEVEKQMPGKYEHVVYCKLSKRQRQLYDGFMGRASTKEILSSGNYMSIINCLM
SLRKVCNHPDLFETRAIVTSMAMPKSVAAQYEIKDLLIRKRLQEGMEDKKVSLDALNLNF
ARREQTQLGHARRTYPIRATRPLEDLIERQTRRINKPVEAGTSPLQSAMAAMAKREQVAV
RDHLQTCVALTRARTQFMPIYGKDIIDAVTVDWHEHTFGAITEGKKVPRPPLYRSHHPPH
ATYHGFGQAHLQPRPEDAIQYDIVQRHHGRLGFRSPRSQRVISQWHDQQITHFFDMIPTL
EQRAEAFEPLITRFTCVTPAVAAEELAPLTLSKRGVDLIRASDAAHQPDPFHSSRIRQSI
AFPDKRLLQYDCGKLQRLATLLRDLQAGGHRALIFTQMTKVLDILEQFLNIHGHRYLRLD
GSTKIEQRQILTDRFNNDPRILCFILSSRSGGLGINLTGADTVIFYDLDWNPAMDKQCQD
RAHRIGQTRDVHIYKFVSEYTIEANILRKSNQKRLLDDVIIQKGDFTTDKFNKVTWRDAL
DEDMGIDTTDEAGAAMERVLGEKIGLLGDARVMGNVEDTEDRTAASIAQKEIVDEIQEDK
VDFNESVNATRAASEAAAASTSKDDEELDIHGNEKLKRHVDEYMLSLYREEFGKEPYRPP
TDRQKRNRKGQDPHVRQRKKKY
NT seq
5109 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagttactgccgcggatcgcgactacgactccatcccaccacgcgactcgacc
gacgcacctagcccgtccgccatcgcgccccatggacacggcaccgacgacgacgacaat
gcgcccctgaccgccaatgacggagagcagcttgcctctgtaaatggccatgatggtggc
gtcattggacggcctgcaaaacggcgaaaattagaagacacgaccaccacgccacgtcgc
tcgacgtcacgcgctgcctcgcccccgtggaaatcatttgtagcagatggccctaccacc
gtcttcgaaaatggcgttaggaagtcatcgcgtgtgaatagagagactgcgccgcccaca
cccgagcccacaaagcccatctcccgccccgcgagcaaagcaacgcataccaacggtacc
cccaagagtgcgaccaggcgcgagtcgcgcaatggctcaggaccgacgtcggtcccgaaa
gggaaggcggcatctgcccttgctaggaaggcgtccgcacaatctttgactacgcctgcc
cgcaagtctgagcggaatacaaagacttctgctctcgccaaacagacaccagtcatgtcg
ccgcaattacaaaacgggtcgcctggcggcggagttcgcaagcggggcactcgccagcgg
aggggcatgcaagtaccgactgacccgccaggtgatgagttcatggatactcccgacacc
aatggtcacgaccccgacgccggcctatacgcgtcgcccgatggctccaatccgtcaata
ccggccccgcgattgcgactacggctccgaaagcccgaccccccgaaccgccatccccat
cacgccccgcccaagtcgcagttcacttcactcgaagaatggttacaacaagatgaccca
ttggaaggcgaggagtcgctccgcataacacaggaaaaggcccaggacgaggcacaacgc
cggttgcgaattgttgaagctgccgaacacggagtactgagtcaagaacgatgcactgtc
tacgctcctgaagctgcgccagaaccgccagctcaatacggtcattgggaccacgtggtt
gcacatactttgcactttaataagctgctcaaagaagaaaaggcgtttcatcgccggacg
gcaaagattctggctagagaagcctacgaattttggaaaaataagttcaagcggaagagt
caggatgaaattgaacaggaagagacggagcggcaggtggctagatacaaacaggtggtc
aaagatgtcaaagacgcgtggggcctggtcaaggttgaaattgacaaggagcgtgtggct
aagtacgaggaggaacagctacagcttggacacaaggccatggacgacatgttcaatcag
gcacaggagattcttggaggtcgcaccgctggtgatggtgcatcctcgctgatgagcgaa
gatcgagatttcgacgacatggaggacttcgagagtgcggtctcaaatacatctgaacaa
cagcttgatgacgatgtcatgtcttcaagttcggatagtgaaccggaaaacgagcaggac
gatgatgcgaatcttaccgctgaacagctacgcgaaaagtatggccaactccctgattta
ccggcgactagttccgaggatgaggatgattacggagatgaagaggaggaagagggcacg
cctgcaccgacccctgacccagatatcgaaactgaagatcttgacgaccccccggaaacg
cttgcgaacggattccatgaccatgaagagaatgaggatgagaagaagccaggttacatt
gacccggctactgtagaactcgatcaggttgacgacgccctcatggattcggaaaacgat
gacaaaagctcggaatccggtagtgaagcttggtcaagcaatgaaggatctgggactgaa
gacgacggggatgacgccgacgactcggaggcagaagacgatgataacagtggagaagaa
gacattggcttgatgggtttcttggcacccaaggatgtgaagaagttgaaagaagctgca
aaaaccgcaatcgaggacaatgagccggagagcgaggaacaaacggcagagcaggttaac
ggccacgccgacacttccatgaaagacgaggaggagaaacctcatgtcaatggacatggt
gcggttgccataaataatgaaccgtgtgtgaacggaaatgcggcaccatcagagcctgca
ccttccattgaggtcgccgaacctcaacaatcggtcgaacccaccgagactactccaatg
gaagatgttgtacagtctaaaaatgtttctcggtctcgtcacgcatcctcgcccccgagg
accgaggtcccgtttctgttacgaggcacactccgagagtatcagcacgacggactggac
tggcttgcgaatttgtacgagtccgacaccaacggtatcctagcagacgaaatgggtctt
ggcaagactatacagaccatctcacttttggcctaccttgctgtccgccacgagatctgg
gggccgcacttggttgtggtacccacgagtgtcatgctcaactgggaaatggagtttcgg
aaatttttgcctggtttcaagatcctcacttactacggcgatatcaacgagcggaaacgg
aagcgattgggatggcgcaacacaggcaaggacatgtacaacgtggtcatcacctcgtac
caactcatactccaagatgctgcggctttcaagatgcgtccttggcgttacctcgtgctc
gatgaagcccataatatcaagaacttcaagtctcagcgttggcagactatgctcaatctt
cgcactgagcgaagactgctgttgacaggaacgcctcttcagaataatattgatgagctt
tggtcgctgctgtacttcctgatgccggctggctttgctggagaagggcgcattgctggt
ttggaggaattcacacttgccctgaagaaccctacatctcaaatcttggatcagggccgt
caacagcttgatgcagaagcacagaagattgtcaagcgacttcacgaggtcctcaggccg
tatctgctccgaagactaaagtctgaagtcgaaaagcagatgccagggaaatatgagcat
gtagtctactgcaagctctccaaacggcaacgtcagctctacgatgggttcatgggccgc
gcatcgacaaaggagatcttgtcgtcgggcaactacatgtccattatcaactgcttaatg
tcattgcgaaaggtctgtaatcatcctgatttgtttgaaacgcgagccattgtcacatcc
atggcaatgccaaaatccgttgccgcgcagtacgagatcaaagaccttcttattcgcaag
cgtttgcaagaaggcatggaagataaaaaagtaagtttggatgctctgaatctcaatttt
gcgcgacgggagcagacacagttgggacatgcccgacgtacttatccaatccgtgccacc
cggcctttggaagacctgattgagcgtcaaactcgacgcatcaataaacctgtcgaggcg
ggtacgtctccactgcaatcggcaatggcggcaatggccaagcgagagcaggtggctgtc
cgagaccatctgcagacatgtgtagctctcacacgcgctcgtacccagttcatgccgata
tacggaaaggacattatcgatgcagtgacggtcgactggcacgagcatacttttggtgcc
atcaccgaaggcaagaaggtacccagaccaccactttaccgatcacaccaccctcctcat
gcgacgtatcatggctttggccaggcgcatctgcagccaaggccagaggatgcgatacag
tacgatattgttcagcgacatcatggtcgtctcggattcaggtctccacgctctcaaaga
gtaatatcacaatggcacgatcaacaaatcacacacttcttcgacatgattccgacattg
gagcaacgcgctgaagcctttgagcccctaatcacgcgcttcacatgtgtcacacccgct
gttgccgccgaggagcttgctccactaaccttatccaaacgtggtgttgacctcatccga
gcctcagacgcagctcaccaaccggatcccttccactcatcgcgcatccggcagtccatt
gcatttcctgataaacgcctgcttcagtacgattgcggaaagctgcaacgtcttgcaaca
ctcctccgggacctgcaagctggtggtcaccgtgctcttatcttcactcaaatgacaaag
gtccttgatatcctggagcagttcctcaacatccacgggcatcgctacttgcgtctcgat
gggtctacaaaaattgaacagcgccagatccttaccgatcgcttcaacaatgacccccgc
atcttgtgctttatcctatcctcacgatccggtggtctcggtatcaatcttactggtgct
gacactgtcatcttctacgacctcgattggaacccagcaatggacaagcaatgtcaagat
cgtgctcatcgaattggtcagacgcgcgatgtccacatctacaagttcgtgagcgagtac
acgatcgaagccaacatacttcgcaagtctaatcaaaagcgtctcctcgatgatgtcatc
atacaaaagggtgattttaccactgataaattcaacaaagtcacctggcgagacgctttg
gacgaggacatgggtatcgatacgaccgacgaagctggggcagccatggaacgtgtgctt
ggcgagaagattggcctcttgggtgacgcacgtgtcatgggcaatgttgaagacaccgaa
gatcgtactgcggcatctattgcgcaaaaagaaatcgtcgatgagattcaagaagacaaa
gtcgacttcaacgaaagcgtcaacgcaacacgagctgcttcagaagctgctgccgcctcc
acctctaaagacgatgaagagttggatatacatggcaatgagaaactcaagagacatgtt
gacgagtatatgttgagcttgtatcgcgaggaatttggcaaagagccgtatcggccgcca
acggatcggcaaaagagaaaccgcaaggggcaggatccgcatgttaggcagcgcaaaaag
aaatattaa
DBGET
integrated database retrieval system