Bipolaris zeicola: COCCADRAFT_102197
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Entry
COCCADRAFT_102197 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K10841
DNA excision repair protein ERCC-6
Organism
bze
Bipolaris zeicola
Pathway
bze03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
COCCADRAFT_102197
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bze03036
]
COCCADRAFT_102197
03400 DNA repair and recombination proteins [BR:
bze03400
]
COCCADRAFT_102197
Chromosome and associated proteins [BR:
bze03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
COCCADRAFT_102197
DNA repair and recombination proteins [BR:
bze03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
COCCADRAFT_102197
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
TFIIF_beta
DUF2730
FapA
Motif
Other DBs
NCBI-GeneID:
19142508
NCBI-ProteinID:
XP_007714607
JGI:
102197
UniProt:
W6XZA1
LinkDB
All DBs
Position
Unknown
AA seq
1222 aa
AA seq
DB search
MLSPSAHEASPVAPATTIDDAPADDGNQIPDEGIASDADETERLKFLTTGTRAQDDLERD
IGRQADQMLIEQADARDKKRIEKLEAEAKRAEAAIQKLKNRLALPALDIQKAKLRGEMAA
YRQKIDDLDKEMDGIQQRINDRHKEPGADEAAGDSANGPLPNETQREWLIRTGKITPFSK
LAQNQPGSGTLGEVMLDAEVEDMVVEAVNGPVSHRNLMKPGFDNVESSSEAPSPHPPARS
RKRRKATPASESGADIGFTDPDSDDAFEPGMTDRQLATLDESDEDVQDTAGDDPYAEEAT
GRKRKAKGKKPKKAKAESTEEAVVEDLAGVDDGNERVYRKRIETWSKNRAAARRKAKANS
GETTAEEEGEEEECYQPHPTEADAEFDGGFRIPGDIYPALFDYQKTGVQWLWELYSQNVG
GIIGDEMGLGKTIQAVSFVAGLHYSKLLTKPVIVVCPATVMKQWVNEFHRWWPALRVSIL
HTSGSGMLDTRREDRIEREMELRKYGDYDTTLTGAGKAAKKILEKVKRDGHVLVTTYSGL
QTYAEFLIPTEWECAILDEGHKIRNPNTAITIHCKELRTPNRIILSGTPMQNNLTELWSL
FDFVFPMRLGTLVNFRNQFEFPIKRGGYANASNLEFETAVRCAETLKDAVSPYLLQRFKA
DVATDLPQKKEQVLFCKLTKQQRQAYESFLASEDMRSIANGKRQMLYGVDYLRKICNHPD
LTEHKTLSKKPGYDYGNANKSGKMQVVKELLSLWKKGGHKTLLFAQHRIMLDILQKFVSQ
LPDINWRRMDGETPIKDRQNMVDEFNTDPNLHVFLLTTKVGGLGVNLTGANRVIIYDPDW
NPSTDIQARERSWRLGQKREVEIYRLMSAGTIEEKIYHRQIFKQFLTNKVLKDPKQRQTF
QMSDLHDLFTLGVESAEGETETGNLFRGSEVKFEEDGKTAVEEKEDATAAKDLAAVKGIS
RSEAFKAPVSDSEETPTNEDGTATDDKTPTDSRLMSTIFAKTGVHSVLEHDAIMNSTAGG
RKRKVQADPAYIQREAKRQAALAAEQLKKSMEEARNVPAGTPTWTGQFGQAGRPDAPRGG
GPSTRGGRGGRGGARGGLPSSTSILNNLAARQGRPVPSTTSDAPTTAAATTSTTPQTFRG
RRMLEMIRDFMLTHGGTVPSRMLVDHFDHYCRAQPGRNEEFKEMLKLIATLEKSGSAQRG
RWVLKDEWRTPPTRGASSVRRG
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcgccctctgcacacgaagcgtcccctgtggcgcctgccaccacaattgacgac
gctccagccgacgatggcaaccagatcccagacgaaggcatcgcctcggatgcggacgaa
acggagagactcaaatttctgacaaccggtactcgagcacaagacgacttggaacgagat
attggccggcaggccgaccagatgctcatagagcaggcagatgctcgcgacaaaaagcgc
atagagaagttggaggctgaggcaaagcgagcagaggctgctatacagaagctcaaaaac
cgtttggctttaccagctctcgatatacagaaggcaaagctccgtggcgagatggcagca
tatcgacagaagatcgacgacctggataaagagatggatggcatacaacagcgcatcaac
gatcgccacaaagaacctggggcagatgaagcagcgggagatagcgcaaatgggccccta
cctaacgaaacacagcgtgagtggcttattcgcacaggaaaaattacgcctttctccaag
ttggcgcagaatcaaccgggctcggggactctaggggaggtcatgctggatgccgaggtt
gaagacatggtggtcgaggcagtaaatggacctgtttcgcaccggaatttgatgaagcct
ggctttgataacgtcgagtccagttcggaagctcccagtccacatcctccagcacgctct
aggaagcgaaggaaggctactcccgctagcgagtccggtgcagacatcggttttacagat
ccggactctgatgatgccttcgagcctggtatgaccgatcgccagcttgcgacgttagat
gagtcggatgaagacgtgcaagacacagccggagatgacccctatgcagaggaagctacc
ggtcgcaagcgcaaagccaagggcaaaaagccgaagaaggccaaagctgaatctacagaa
gaagcagtggttgaggatcttgcaggtgttgatgacggtaatgagcgagtctaccggaaa
cgcattgagacttggtcaaagaaccgagcagctgcaaggaggaaggcgaaagccaatagt
ggcgagacaactgcagaggaagaaggagaagaagaagagtgttaccagcctcatcctact
gaagccgatgcagagttcgatggtggatttcgaattcctggtgatatctatccagcatta
ttcgactatcagaagacgggtgtgcagtggttatgggaactgtattctcaaaacgtgggc
ggtatcattggagacgagatgggtcttggtaaaacaatacaggccgtcagcttcgttgca
ggcctacattattcgaagctactaaccaagcctgttattgtggtatgcccagcaaccgtc
atgaagcagtgggttaatgagtttcaccgctggtggccagctctacgtgtatctatccta
catacgtctggtagcggtatgctagatacccgacgcgaagaccgcatagaacgggagatg
gagcttcggaaatatggcgactacgatacgactctgactggcgctggtaaagctgctaag
aagattctcgaaaaagtcaagcgggatggacacgtactcgtcaccacttactcggggctg
caaacatacgccgagtttctgattccgactgaatgggaatgcgccatcttagatgaggga
cacaagattcggaaccccaacactgctattaccattcactgtaaggaacttcgtacacca
aaccgcatcatcctctcgggaactccaatgcaaaacaatctaacagaactttggtcactg
ttcgactttgtcttccctatgcggcttggtacccttgtcaactttcgcaaccagttcgaa
tttccaattaagcgtggaggatatgcaaatgcttcgaatctagagtttgagactgcagtc
cgatgcgctgaaaccctaaaagatgctgttagcccatacttgctccagcgtttcaaggct
gatgttgcaactgatttgccacagaagaaagaacaagtgctgttctgtaagttaacaaaa
cagcagcgacaagcttacgaatcctttctagcatcagaggatatgagatcgatcgcaaac
ggaaagcgccagatgctttacggcgtcgactatctccgcaagatatgcaaccatcctgac
cttacggagcacaagactctgtccaagaagcctgggtacgattatggcaatgccaataaa
tcgggaaagatgcaggtcgtcaaggagttactatcgctgtggaagaagggcgggcacaag
acgttactctttgctcagcaccgcatcatgcttgacatcctgcaaaagttcgttagccag
cttcctgacatcaactggcggcgaatggatggcgagacacccatcaaggatcggcaaaac
atggtggacgagtttaacacggatccgaaccttcatgttttcttactcaccacgaaagtc
ggtggacttggcgtcaacctcacaggtgccaatcgcgttatcatatacgacccagattgg
aatccgtcgactgatattcaggctcgagagcgatcgtggcgtctgggacagaagcgagaa
gtcgagatctaccgcctcatgtcggctggtactatcgaagagaagatctaccatcgtcaa
atcttcaagcagttcttgaccaacaaagtgctgaaggacccaaaacagcgacagacgttc
cagatgagtgatctgcacgatttgttcacacttggtgttgagagtgcagagggggagaca
gaaaccggtaacttgtttcgcggctccgaagtcaaattcgaagaggatgggaaaacagca
gtagaagaaaaggaagatgctacagcagccaaggatctcgctgctgtaaaaggcatatca
cgatccgaagctttcaaagctcctgtttccgactctgaagagactcccacgaacgaagat
gggactgctaccgacgacaaaacgcccacagattcccgtctcatgtctaccatatttgcc
aaaaccggcgtccactcggtgctcgagcacgatgctattatgaactcgacagctggggga
cgcaaacgcaaagtgcaagccgatcccgcctacatccaacgcgaagcaaagcgacaagcc
gccctggcagccgagcagctgaaaaaaagtatggaagaagcgagaaacgtgcccgcagga
accccgacctggactggccaattcggtcaagcaggacgccccgacgcccctcgcggagga
ggcccatctacgcgcggtggtcgtggtggacgcggaggtgctcgcggcggcctcccctct
tcaacctcgatcctcaacaatctcgccgcgcgtcaaggccggccagtgcccagtacgaca
tcagacgcccccaccaccgctgctgccactactagcacgacgccccagactttccggggg
cgccggatgctcgaaatgatccgtgactttatgcttactcacggcgggacagtccccagc
cgcatgcttgtcgaccactttgaccactactgtcgtgcgcagcctggtagaaacgaggag
ttcaaggaaatgctcaagttgattgctacgcttgagaagagcgggagtgcgcagaggggg
aggtgggtgctcaaggatgagtggaggactcctcctacgaggggggcgtcaagtgttcgt
cgtggatag
DBGET
integrated database retrieval system